- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S34.g01480.01.t
Possible name(s)
GJC1; GJC2; GJD2
Gene model
Location
S34 [352,792 / 355,290]
Amino acid sequence
Length: 633
>Harore.CG.MTP2014.S34.g01480.01.p
MSWHFLERWIEKANQHSTLVGKFWITFLIVCRMVIVASVGDRVYSDEQTEFKCNTMQPGC
TNVCFNKFSPISHLRFWSFQILLVATPSVMYIVYSGHNQKKAKASKSKKHLRKKLAALAS
GQPKMYRQPLSGKEVSEGDGDINVNANNNNNTDVASSKRQQKNTKRSPGAYSNRKAKDRK
NSQNTAGEHHSDPAGNSKNVLSTLINYKYDADIEDYVAADAGKNPQVPWQERRWDSVMQV
AENGNNHGNGLWRKPKEHRRNQYLESEKGMAIKGKNSNLNADVILWVPSSSDDETRSGKG
GKFRNVGQNSLTEVDMHQNTDLLGEEHVIDVDKGILEMGKDNYVIPYDPAPPQYPGNVAK
DEYWAIKRAEENKKKINRGRRGLPQLKIIRTRTRKPRFTRHFHLYLLSVFSRLALEIAFL
LLQIKLFGFSVSESYKCEQAPCPNIVDCFPSRPMEKTIFLYFMLIYTCLCVLLNLVEFKY
LIWVYIFGRPALVSITSGDHNKDGTRIIYDKNGEPRYTARFVDGEEVFTDINDEDIESIY
GGGVVNGIYRYGYNDIGLRKRQNKQLDKCNEKSMGPGLHLERMDHRNQLELEMEMERDER
EDYDLELALNEANDDIVEMEMDAGSVGGNDDFS
Nucleotide sequence
Length: 1,902
>Harore.CG.MTP2014.S34.g01480.01.t
ATGTCTTGGCATTTTCTTGAACGATGGATCGAAAAAGCAAACCAGCATTCGACTTTAGTC
GGCAAATTTTGGATTACTTTTCTCATAGTTTGTCGAATGGTTATTGTGGCGTCAGTTGGT
GACCGTGTCTACAGCGACGAACAAACCGAATTTAAATGTAATACGATGCAACCGGGTTGT
ACGAATGTGTGTTTCAATAAATTTTCACCGATTTCCCATTTACGTTTTTGGAGTTTTCAA
ATTCTCTTGGTGGCAACGCCCTCAGTCATGTACATAGTCTATTCGGGGCACAATCAGAAA
AAAGCGAAGGCCTCAAAAAGTAAAAAACATTTACGAAAGAAACTTGCTGCACTGGCCAGT
GGTCAGCCAAAGATGTACCGTCAGCCGCTATCTGGCAAGGAAGTGAGTGAAGGAGATGGT
GATATCAATGTGAACGCCAATAACAACAATAATACCGACGTGGCTTCGAGCAAACGCCAG
CAAAAGAATACCAAAAGATCTCCGGGTGCCTATTCAAATCGCAAAGCCAAAGATCGAAAG
AATAGCCAAAATACGGCGGGAGAACATCACTCCGACCCGGCAGGAAATTCAAAAAATGTC
CTTTCAACATTGATAAATTATAAATACGACGCTGACATCGAAGACTACGTTGCTGCAGAC
GCAGGGAAAAATCCACAGGTTCCATGGCAAGAAAGGAGATGGGACAGTGTAATGCAAGTA
GCGGAAAACGGGAATAATCACGGTAATGGCTTATGGAGAAAACCTAAAGAACATAGACGC
AATCAGTACCTGGAAAGTGAGAAAGGCATGGCTATCAAAGGGAAAAACTCGAATTTGAAT
GCAGATGTGATATTGTGGGTACCTTCCAGCTCTGATGATGAAACCAGAAGCGGAAAAGGA
GGGAAGTTCAGAAACGTGGGACAGAACTCATTAACGGAAGTCGACATGCACCAAAATACT
GACTTGCTTGGCGAAGAACACGTCATAGATGTTGACAAAGGAATACTCGAAATGGGAAAA
GATAATTACGTCATTCCCTATGATCCCGCACCTCCACAATACCCAGGAAACGTCGCAAAG
GATGAATACTGGGCCATAAAACGAGCCGAAGAAAATAAAAAGAAAATAAATCGAGGTAGG
AGAGGTCTTCCACAACTAAAAATCATCAGAACTAGAACGAGAAAGCCACGATTCACTCGT
CATTTCCATCTATATCTCCTTAGCGTTTTTTCTAGACTTGCTTTAGAAATAGCGTTTTTA
TTGCTGCAAATAAAACTGTTTGGGTTTTCCGTTTCGGAATCGTACAAATGCGAGCAAGCT
CCTTGCCCGAACATCGTGGACTGTTTCCCGTCTCGGCCTATGGAAAAGACCATTTTCCTT
TATTTTATGCTGATTTACACCTGTCTGTGCGTTTTGCTCAACCTCGTGGAATTCAAATAC
CTGATATGGGTCTACATATTCGGTAGACCTGCTCTTGTATCTATAACTTCAGGAGATCAT
AACAAAGACGGCACCAGGATCATCTACGACAAAAACGGGGAGCCAAGATACACGGCGCGT
TTCGTAGACGGAGAGGAAGTGTTCACCGATATAAACGACGAGGATATCGAGTCGATTTAC
GGCGGCGGGGTGGTCAACGGGATATACCGTTATGGCTACAATGACATCGGGCTTAGGAAA
CGACAAAATAAGCAACTGGATAAATGCAATGAAAAATCAATGGGTCCCGGCTTGCATCTG
GAGAGAATGGATCACAGAAATCAGTTGGAACTCGAAATGGAAATGGAAAGGGACGAGAGA
GAGGATTACGATTTGGAGCTCGCTCTCAACGAGGCGAACGACGACATCGTTGAAATGGAA
ATGGACGCGGGAAGCGTGGGAGGAAACGACGACTTCTCGTGA
| PANTHER |
Connexin (IPR000500) - T[1-169] 1.7E-100 - T[357-486] 1.7E-100 |
| Gene3D |
Connexin_N_sf (IPR038359) - T[1-136] 7.1E-45 - T[357-490] 4.6E-32 |
| Pfam |
Connexin_N (IPR013092) - T[2-158] 3.7E-49 - T[385-483] 1.2E-32 |
| PRINTS |
Connexin (IPR000500) - T[20-44] 6.3E-20 - T[51-73] 6.3E-20 - T[76-96] 6.3E-20 |
| SMART |
Connexin_N (IPR013092) - T[42-75] 6.6E-15 |
| SMART |
Connexin_CCC (IPR019570) - T[415-481] 1.8E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 53.782 % | 140 | 1.49E-36 |
| CXG2_HUMAN | 54.369 % | 139 | 8.32E-36 |
| CXD2_HUMAN | 50 % | 123 | 4.82E-31 |
