- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S231.g14551.01.t
Possible name(s)
RDH11; RDH12; RDH13
Gene model
Location
S231 [123,664 / 125,753]
Amino acid sequence
Length: 300
>Harore.CG.MTP2014.S231.g14551.01.p
MASEYSWKNVQMTGKTVLITGASSGIGLETAIDLAKRGAKIIIACRNFEKAFTAKRKIVC
EYENAKVEVRKLDLRSLDSVRKLTKSIIRTESRLDVVINNAGIMEFERSETCDGFESHFG
VNYLGHFLLTTSLLSLLKKSAPSRIISISSEAHKFACLNWNDLNGEDTYVCYKAYGQSKL
FLILFTKYLGRSLEGTGVTTYSVHPGIVDTNLCHRATLGKSAAEIVAYFLLQFKCLLKTS
KQGAQTIIYCSVSLELDRVSGGYYCNCKEVKESKLAQNEEEARRLWALSVQLVSNWTLNE
Nucleotide sequence
Length: 1,074
>Harore.CG.MTP2014.S231.g14551.01.t
TATCAATACCGAAAATATTTTAAACTGAACAGGCAAGGTGGAAAATAGCTCAGTGTTGTA
GCACCTTGACACTTCTTTCAACACATAACAAGCGAATGCATGGCGAGTGAATACTCTTGG
AAGAATGTACAAATGACTGGGAAGACTGTACTAATTACTGGTGCAAGTTCGGGTATAGGA
CTCGAGACTGCAATTGACTTGGCCAAGCGGGGAGCCAAGATTATTATCGCTTGCAGAAAT
TTCGAGAAGGCATTCACAGCGAAGAGAAAGATCGTTTGCGAATACGAGAATGCAAAGGTT
GAAGTAAGAAAACTTGATCTACGCTCATTGGATTCTGTGAGAAAATTAACAAAATCCATT
ATCAGAACAGAATCCAGACTAGATGTGGTTATCAATAACGCAGGAATAATGGAATTCGAA
AGATCGGAAACGTGCGATGGATTCGAATCGCATTTTGGTGTGAACTATCTTGGACATTTT
TTACTAACAACATCATTGCTATCGCTTTTAAAGAAAAGTGCTCCCAGTCGCATAATATCG
ATTTCATCAGAAGCTCATAAGTTTGCATGTTTGAATTGGAACGACTTGAACGGTGAAGAT
ACATACGTTTGCTACAAAGCCTATGGTCAGAGTAAATTATTCCTCATACTTTTCACAAAA
TATCTCGGCCGTTCATTAGAAGGGACAGGCGTGACAACATACAGTGTTCATCCTGGAATC
GTTGATACGAATTTATGTCATCGAGCGACGCTCGGGAAATCCGCTGCAGAAATCGTCGCA
TATTTTCTTCTCCAATTCAAATGTTTATTGAAAACATCTAAACAAGGAGCACAAACAATC
ATATACTGTTCTGTCTCGCTTGAACTTGATCGTGTTTCAGGAGGGTACTACTGCAACTGC
AAGGAAGTAAAGGAATCAAAGCTTGCACAAAACGAGGAGGAGGCAAGGCGTCTGTGGGCA
CTTAGCGTGCAGTTGGTGTCCAATTGGACTCTCAACGAATGAGACGCTAAACTGTATTTC
GAATGCTCGCTAGATGACTTACGTTGCTGTGCCATAGAATTCTGTGCGTTTTCC
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[12-269] 2.0E-56 |
| Pfam |
SDR_fam (IPR002347) - T[15-214] 6.2E-35 |
| PRINTS |
SDR_fam (IPR002347) - T[16-33] 1.2E-17 - T[92-103] 8.6E-6 - T[92-103] 1.2E-17 - T[137-153] 1.2E-17 - T[143-151] 8.6E-6 - T[175-194] 8.6E-6 - T[175-194] 1.2E-17 - T[196-213] 1.2E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 45.423 % | 233 | 1.34E-75 |
| RDH13_HUMAN | 46.479 % | 225 | 3.06E-72 |
| RDH12_HUMAN | 44.211 % | 233 | 1.48E-75 |
