- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S221.g14603.01.t
Possible name(s)
BCL2L2-PABPN1; PABPN1; PABPN1L
Gene model
Location
S221 [30,296 / 32,725]
>Harore.CG.MTP2014.S221.g14603.01.p
MSDILDQDNSLDGLNSHDGDSLGVDDSAILDHSTADISQNADSIVEDPELEAIKARVKEM
EAEAEKLKEMQNEVEKQISLSPTQATGAVAFPSIEEKVEADARSIYVGNVDYGATAEELE
QHFHGCGSVNRITILCDKFSGHPKGFAYIEFVDKESVETSVALDGSLFRGRQIKVNPKRT
NKPGFVFMERGGGGGRPRGRPRYRARGYYYPRPRRAYRGRVRATYYSPY
>Harore.CG.MTP2014.S221.g14603.01.t
AGACTCTACTTGTCGTATTTAAGTTAACGAAAAAGTCATGTCAGACATTCTTGATCAAGA
TAATAGTTTAGATGGTTTGAATTCTCATGATGGAGATTCCTTGGGTGTTGATGATTCCGC
GATACTGGATCACTCCACAGCAGATATCTCACAAAATGCAGACAGCATAGTTGAAGATCC
TGAGCTTGAAGCAATTAAAGCCCGAGTTAAGGAAATGGAAGCTGAGGCAGAGAAGTTAAA
AGAAATGCAAAATGAGGTTGAAAAACAAATAAGTTTGAGTCCAACTCAAGCAACCGGAGC
TGTTGCCTTTCCATCCATTGAAGAAAAAGTCGAAGCAGATGCAAGATCAATTTACGTTGG
AAATGTCGACTATGGGGCTACAGCAGAGGAATTAGAGCAACATTTTCACGGATGTGGTTC
AGTAAATAGAATAACCATATTATGTGATAAATTTTCTGGACATCCGAAAGGGTTCGCCTA
CATTGAATTTGTCGATAAAGAGTCGGTGGAAACTTCGGTAGCGCTGGATGGCTCACTTTT
TAGAGGAAGACAAATTAAGGTCAATCCCAAACGGACAAACAAACCTGGATTTGTATTCAT
GGAGCGTGGTGGTGGCGGTGGAAGGCCACGTGGACGACCTCGGTATCGTGCTAGAGGTTA
TTATTACCCGAGACCACGTAGAGCCTACAGGGGCAGAGTAAGAGCGACGTATTATTCACC
ATACTGAAAAAATCAGCGGTGTCTTGTAAGTTGATTTATACTTTTTGGTTTAGACAGCTT
TACTTCTGTTACACTCGATAAATCGAATATTCAAGTCACAACTTCCGCTAAAAAAGACAT
TACCCAATTGCCTGTTCAGTCATATTAACATTTTATTGTAATTTTATTTACTTGACTTGG
GAATTTTTAAGTTTTACATTACGGACTCTGTCGTACAAGTTTTATTCATAGAACATTGTT
AAATTATATGTAGGCATTTCTCTGTTTTGCTTTGGTTTCGTTTATGTTTTTTTTTGTTCG
ACTTGTGCTGAAAATTGACCAGCGGTATCTTGTTTTCAATCTTGTGATACATGCTTCGGT
AAGAACACTACCACTTCTGGGTAAGTAGGATTC
PANTHER |
PABP2 (IPR034911) - T[18-229] 1.2E-95 |
SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[95-207] 7.58E-30 |
Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[97-185] 2.8E-25 |
ProSiteProfiles |
RRM_dom (IPR000504) - T[103-180] 17.097 |
SMART |
RRM_dom (IPR000504) - T[104-176] 7.8E-20 |
Pfam |
RRM_dom (IPR000504) - T[105-174] 9.1E-17 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
PABP2_HUMAN | 69 % | 238 | 1.6E-78 |
EPAB2_HUMAN | 49.048 % | 167 | 2.68E-51 |