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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S31....' > 
  2. Transcript 'Cisavi.CG.ENS81.R79....' > 
  3. Clone 'citb9l8' > 
  4. Clone 'cima003d12' > 
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S20.g14107.01.t

Possible name(s)

DMGDH; FOXRED1; SARDH

Gene model

Harore.CG.MTP2014.S20.g14107

Location

S20 [392,297 / 396,771]

Sequences

Amino acid sequence

Length: 589

>Harore.CG.MTP2014.S20.g14107.01.p
MVEETITTDNDDEKRGIEIIHWGYPHRSDSGVKFLLLSERIHDECNCNIKSIMASRKIYT
ILLLRGANGRLFSSNVLGRYPSRLATRKAPVRNILAGCQSTREVRMHTEIEYDSPFEVGE
AYDIHLDKMHQQSGPVVVPNNEVEFLIIGGGIMGLALAYNLWRKLEILSPLKASKYLAPV
ILCVEKDPTLTHASTPLSVGGVRQQFSHPCNVRLSMMGAQFLRDIRLHLGVAGHDDPDVQ
FQSQGYLMLATKNGADQLMKNYQTQIDEGAKVMLLSQKKLKEVFPWLNVEDIELATYGLE
NEGWLDPWALVNAFKTKLPSLGVRYLQGEVVGFKKRKLTGIISEIHEKFINLPDGTEVKA
KDDPQGAYVKFPDCDKPVFIKARGIINCAGAWSNDISKMMGIGVDKPDCHPILKTELPVR
PRKRYVFVFHCPDGPIYDCPMLVDPSSLYFRREGFGGNYVCGIDPPEKDKIDHSNLEVDY
DVFYEEIWPKLAHRVPVFEKLKLKSAWAGYYDYNTFDQNGIIGPHPYYPNFCYLTGFSGH
GLQQAYGAASCLAEIMVSRADVDCKAIDIDKFSFNRIIEDDPMLEANII

Nucleotide sequence

Length: 1,770

>Harore.CG.MTP2014.S20.g14107.01.t
ATGGTGGAAGAAACGATAACTACTGATAATGATGATGAGAAGCGCGGGATAGAAATTATA
CACTGGGGTTATCCGCACCGATCAGACTCCGGCGTAAAGTTCTTACTGCTATCTGAGCGA
ATTCATGATGAATGCAATTGCAATATAAAAAGCATCATGGCCTCAAGGAAAATTTACACA
ATTTTATTGCTACGTGGTGCAAATGGAAGATTATTTTCATCGAATGTTCTAGGAAGATAT
CCGAGCCGATTAGCTACCAGGAAAGCACCAGTGAGGAATATCCTAGCAGGATGTCAGTCT
ACCCGAGAAGTTAGGATGCACACCGAAATAGAATATGATAGTCCTTTTGAAGTAGGAGAG
GCATATGACATTCATCTCGATAAAATGCACCAGCAGTCAGGGCCTGTAGTTGTTCCGAAC
AATGAAGTGGAGTTTCTCATCATTGGTGGTGGAATTATGGGACTTGCGTTAGCATACAAT
CTCTGGCGAAAGTTGGAAATCCTGTCTCCTTTAAAAGCTTCAAAGTACTTGGCGCCGGTT
ATATTATGCGTAGAAAAAGATCCGACGCTCACCCATGCATCAACACCTCTCTCTGTGGGT
GGAGTAAGGCAACAGTTTTCCCATCCATGCAACGTAAGGCTGTCTATGATGGGTGCTCAG
TTTCTTCGTGATATTCGACTGCATTTAGGTGTTGCTGGCCACGATGATCCGGATGTCCAG
TTTCAAAGCCAGGGTTACCTAATGTTGGCGACGAAAAACGGCGCAGATCAGCTGATGAAA
AATTATCAGACTCAAATTGACGAAGGTGCAAAGGTGATGCTGCTCAGTCAGAAGAAGTTA
AAGGAAGTATTCCCATGGCTGAATGTTGAAGACATAGAACTGGCAACATACGGCTTGGAA
AACGAAGGCTGGTTAGATCCATGGGCATTAGTAAATGCTTTTAAAACAAAGCTGCCTAGC
CTTGGAGTTAGGTATTTGCAAGGTGAGGTTGTCGGATTTAAGAAAAGAAAGCTAACCGGA
ATCATTTCAGAAATTCATGAAAAATTCATCAACTTACCGGACGGCACAGAAGTCAAGGCC
AAGGATGATCCTCAAGGAGCTTATGTAAAATTCCCCGATTGCGATAAGCCGGTTTTTATA
AAAGCCAGAGGGATAATCAACTGTGCTGGTGCTTGGTCTAACGATATATCCAAAATGATG
GGAATTGGCGTAGACAAACCTGATTGCCATCCGATACTCAAAACAGAGCTGCCTGTCAGA
CCAAGAAAGCGATACGTCTTTGTCTTTCACTGTCCTGATGGCCCCATTTACGACTGCCCC
ATGTTGGTCGACCCCAGCTCCTTGTATTTTCGCAGAGAGGGGTTCGGAGGAAACTACGTT
TGCGGCATCGATCCTCCGGAGAAAGATAAAATCGATCACTCCAACCTGGAAGTAGATTAC
GACGTGTTTTATGAAGAGATCTGGCCGAAACTAGCCCATCGCGTTCCGGTTTTTGAAAAA
TTAAAATTGAAGTCTGCCTGGGCAGGATATTATGACTACAACACATTTGACCAAAATGGG
ATAATCGGACCCCATCCGTACTACCCCAACTTCTGTTACCTTACAGGGTTCAGTGGTCAT
GGTCTCCAGCAAGCCTACGGTGCTGCGTCGTGTCTGGCAGAAATCATGGTTTCCCGTGCA
GATGTCGACTGTAAGGCGATCGACATAGACAAATTCAGTTTTAACCGAATCATTGAAGAC
GATCCAATGCTGGAGGCGAACATTATATAA

InterProScan

Gene3D
FAD/NAD-bd_sf (IPR036188) - T[145-242] 9.9E-85 - T[302-405] 9.9E-85 - T[516-555] 9.9E-85
Pfam
FAD-dep_OxRdtase (IPR006076) - T[145-555] 2.7E-47
SUPERFAMILY
FAD/NAD-bd_sf (IPR036188) - T[145-340] 8.42E-27 - T[366-406] 8.42E-27 - T[516-563] 8.42E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FXRD1_HUMAN 45.823 % 361 3.27E-119