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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S16.g04218.01.t

Possible name(s)

Harore.CG.MTP2014.S16.g04218

Location

S16 [577,162 / 580,543]

Sequences

Amino acid sequence

Length: 358

>Harore.CG.MTP2014.S16.g04218.01.p
MYWLMKSVPYACLYIDISWRDAFQCLKCIITSSENKVKMEEVLRDLQNLWTSCSHSSNIL
VTLSFRSALDMYLKVKNFPAGSEVIMTSINIPNVASIVVHHGLVVVPCDIDPGTLAPDIH
KLKECITEKTVAILVAHIYGRRMDMAPIVELFKPYKVQVIEDCAEGFSGLSYTGHEGSDI
ATFSFGTIKHCTAFGGALSKIKSRETYESMAKLQEAYPEQSRFTYALKFFKCCIFACVLN
IPMIVRLSHYESKDYALTIQTGDYVRERLPVEERPDDVVEFLSNNGIDATRGSTQLKVMN
ATVEGRSDPILSRFIMDHVVYLPVHKRVPFDHLDEIVQGVKQAIIELGCKRLQLPKVV

Nucleotide sequence

Length: 1,307

>Harore.CG.MTP2014.S16.g04218.01.t
GGGCTGTGTAACATCTCTGTAAATATATAGACAGCGTTACGTAGGATAAGAGAAGGACGT
TGGATATGTATTGGCTGATGAAGTCTGTGCCTTACGCATGCCTATATATTGACATATCAT
GGAGAGACGCGTTCCAGTGTTTGAAATGTATAATCACAAGTTCAGAAAACAAAGTAAAAA
TGGAAGAAGTGCTTCGTGATTTACAAAATCTTTGGACGTCTTGTTCTCATTCTTCAAATA
TTTTAGTTACATTGTCTTTCCGTTCTGCACTTGATATGTACCTGAAGGTCAAAAACTTCC
CAGCGGGCAGTGAAGTAATAATGACATCTATCAATATACCCAATGTAGCTTCAATTGTTG
TTCATCATGGACTTGTTGTTGTGCCTTGTGACATTGACCCTGGTACATTGGCACCAGACA
TCCATAAACTGAAAGAATGCATTACTGAAAAGACCGTTGCCATTTTGGTCGCCCATATTT
ATGGCAGAAGGATGGATATGGCACCTATTGTCGAACTTTTTAAACCATACAAGGTTCAAG
TGATTGAGGATTGTGCAGAGGGATTTTCAGGATTGAGCTATACGGGGCATGAAGGAAGTG
ATATTGCGACATTCAGTTTCGGAACAATTAAGCATTGTACCGCATTTGGTGGAGCTTTGT
CAAAAATAAAATCCAGAGAGACTTACGAAAGTATGGCAAAATTACAAGAAGCATATCCTG
AACAGTCTCGTTTCACCTATGCTTTAAAGTTCTTCAAGTGCTGTATTTTTGCGTGTGTGT
TAAACATACCTATGATAGTCAGGTTGAGTCACTATGAAAGCAAAGATTATGCCCTGACAA
TCCAAACAGGAGATTACGTGAGGGAGCGTCTACCTGTAGAGGAAAGACCAGATGACGTGG
TCGAGTTTTTGAGCAACAATGGTATAGATGCAACACGAGGAAGCACCCAGCTTAAAGTTA
TGAATGCAACTGTGGAAGGACGAAGTGATCCTATTTTATCAAGGTTCATTATGGACCATG
TCGTGTATCTACCTGTACACAAAAGAGTGCCCTTCGATCATCTGGATGAAATTGTGCAAG
GGGTTAAACAGGCTATAATTGAACTTGGGTGCAAACGTTTACAGTTACCAAAGGTTGTCT
AGAACATGAACTTCTCTATGCAAGACAACAAACTCAATTACATCATGTAGCTAAGTTTCT
ATTTTAGATTTTCAAATTGCATCATTGAATGTATTATAGAATTTTATTTTTATATAACTA
GATTTATTTAATACTCTGTCTGAAAACTTTGTTATTTATTATGTTTC

InterProScan

PANTHER
DegT/StrS_aminotransferase (IPR000653) - T[8-249] 1.1E-96 - T[273-346] 1.1E-96
Gene3D
PyrdxlP-dep_Trfase_major (IPR015421) - T[19-239] 1.9E-36
PIRSF
DegT/StrS_aminotransferase (IPR000653) - T[27-230] 1.1E-33 - T[243-346] 7.1
SUPERFAMILY
PyrdxlP-dep_Trfase (IPR015424) - T[44-344] 1.12E-33
Pfam
DegT/StrS_aminotransferase (IPR000653) - T[59-214] 7.4E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value