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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S111.g13552.01.t

Possible name(s)

FUT3; FUT5; FUT6

Gene model

Harore.CG.MTP2014.S111.g13552

Location

S111 [193,241 / 196,074]

Sequences

Amino acid sequence

Length: 455

>Harore.CG.MTP2014.S111.g13552.01.p
MEMKFYAIRKLSWSALLLASLSLLISSIAIMESSSIKKYTMRLVNDELARENLTAIKKYK
FAMPLALSNVQKSEVEWALIKAQNNRKIILEWYGKKRSENLVMSGVCGNCEVVSDKEMIE
HNDTAVVVFRYKFIRPMSMPPKENRRADQLYVWQTGESPPALLYLRRRNFQYEDKYGFNA
TMTYRRDADIYFPYGSVLGLLSQLRKTSGNKSLILKNKKKMVVAVMSNCHSLSGSNVRLQ
FLRDLIADGLQADTFGECFQNSTYGKRDHENFHKLLKTYKFYIAFENSYHCRDYITEKFF
INGLQSMSIPIVWGTERKDYEAIAPVKSFIYADDFVTTKDLVKYLNYLDSNETAYLEHFR
WYDMPQINIPGYGRQIRYCQLCRIAHGINVDDIFSPSFNKTNPIRPIVSDSMSQRIVPSL
YNWYYDQDNKDCLKTASQVYKDNYSLAARTLDGRT

Nucleotide sequence

Length: 1,368

>Harore.CG.MTP2014.S111.g13552.01.t
ATGGAAATGAAGTTTTATGCCATCAGGAAGCTATCATGGTCTGCCCTGCTACTGGCTTCG
TTATCCTTACTGATTTCTTCGATTGCGATTATGGAATCTTCGAGCATTAAAAAGTATACG
ATGAGACTCGTAAACGATGAGCTTGCCAGAGAAAACCTCACTGCCATAAAGAAATACAAG
TTTGCAATGCCATTGGCTCTTAGCAATGTACAAAAATCTGAAGTGGAGTGGGCATTGATT
AAGGCACAGAATAATAGAAAGATCATTCTTGAATGGTACGGTAAAAAAAGAAGCGAAAAT
CTCGTCATGTCGGGTGTGTGCGGAAATTGTGAAGTTGTGTCAGATAAGGAAATGATTGAA
CACAATGACACTGCAGTTGTTGTTTTTCGTTACAAATTTATAAGACCTATGAGCATGCCA
CCAAAAGAAAATAGGCGAGCAGATCAACTGTACGTATGGCAAACTGGGGAAAGTCCTCCG
GCTCTACTTTATCTAAGAAGACGCAATTTCCAGTATGAAGATAAATATGGATTCAACGCA
ACAATGACATACCGGCGTGACGCAGATATATATTTCCCATACGGCAGCGTTCTCGGTTTA
CTATCCCAGCTGAGGAAAACATCTGGAAATAAATCACTAATCCTTAAGAACAAAAAGAAG
ATGGTAGTCGCTGTTATGTCAAATTGCCATTCATTATCTGGATCCAACGTTCGGCTCCAG
TTTTTACGTGATCTTATTGCTGACGGCCTGCAAGCGGATACCTTTGGCGAATGCTTTCAG
AACTCGACGTACGGAAAGAGAGATCATGAAAATTTCCACAAACTTTTAAAGACTTATAAG
TTTTACATTGCTTTCGAAAATTCCTATCATTGTCGAGATTATATTACAGAAAAATTCTTC
ATTAACGGATTGCAGTCTATGTCGATTCCGATTGTGTGGGGTACGGAACGGAAAGATTAC
GAAGCAATTGCGCCTGTCAAATCGTTTATTTATGCTGATGATTTCGTCACAACTAAAGAT
TTGGTCAAATATTTGAATTATCTAGACTCGAACGAAACAGCATACTTGGAACATTTCAGA
TGGTACGACATGCCACAGATCAATATACCAGGCTACGGACGTCAAATAAGATATTGCCAA
CTATGCAGAATTGCGCACGGAATAAACGTAGACGACATTTTCAGTCCCTCCTTCAACAAA
ACCAATCCTATTCGACCAATTGTAAGCGATTCCATGTCTCAAAGAATTGTTCCATCGCTC
TATAACTGGTACTACGATCAAGATAATAAAGACTGCCTTAAAACTGCTTCTCAAGTTTAC
AAAGACAATTATTCACTTGCTGCACGAACGCTTGATGGACGAACATGA

InterProScan

PANTHER
Glyco_trans_10 (IPR001503) - T[71-436] 7.6E-83
Pfam
Glyco_tran_10_N (IPR031481) - T[85-195] 3.1E-17
Gene3D
GT10-like_sf (IPR038577) - T[163-369] 2.8E-35
Pfam
Glyco_trans_10 (IPR001503) - T[218-386] 6.3E-48

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FUT3_HUMAN 31.786 % 143 1.21E-38
FUT5_HUMAN 31.673 % 138 9.09E-37
FUT6_HUMAN 32 % 145 1.62E-39