- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C2.101.v2....' >
- Transcript 'NCBI:KH.XM_018815956...' >
- Region 'REG00000493' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g27308.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
chrUn [178,596,656 / 178,598,633]
Amino acid sequence
Length: 379
>Boschl.CG.Botznik2013.chrUn.g27308.01.p
MEQDDEEEQTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIM
RLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL
EKSYELPDGQVITIGNERFRCPETMFQPSFVGMESSGVHETTYNSIMKCDIDIRKDLYAN
NVLSGGTTMYPGIADRMQKEITALAPATMKIKIIAPPERKYSVWIGGSILASLSTFQQMW
ITKQEYDESGPSIVHRKCF
Nucleotide sequence
Length: 1,140
>Boschl.CG.Botznik2013.chrUn.g27308.01.t
TGGAACAGGACGATGAAGAAGAACAGACCGCGCTGGTGTGCGACAACGGTTCCGGATTAG
TGAAAGCCGGTTTCGCCGGAGATGACGCTCCGCGCGCAGTATTCCCCTCCATTGTCGGTC
GTCCTAGACATCAGGGCGTCATGGTCGGTATGGGACAAAAAGACAGCTACGTCGGCGACG
AGGCTCAGAGCAAGAGAGGTATCTTGACTCTGAAATACCCGATCGAACACGGAATCATCA
CAAACTGGGATGACATGGAAAAGATCTGGCATCACACCTTCTACAACGAACTCCGAGTAG
CACCCGAAGAACACCCAGTCTTGCTCACAGAAGCCCCCCTCAACCCGAAAGCTAACCGTG
AAAAGATGACACAAATCATGTTCGAGACCTTCAACGTTCCCGCCATGTACGTCGCCATCC
AGGCTGTACTTTCCCTATACGCTTCCGGCAGAACCACAGGTATTGTCCTTGATTCCGGAG
ACGGTGTCTCGCACAACGTACCCATCTACGAAGGTTATGCCCTCCCTCACGCCATCATGC
GTCTCGATCTTGCGGGTCGTGACCTCACAGATTACCTCATGAAGATCCTGACAGAGCGTG
GCTACTCATTCGTGACTACCGGGGAAAGAGAAATCGTCCGTGACATCAAGGAGAAGCTGT
GCTATGTCGCTCTTGACTTTGAACAAGAAATGGCCACCGCCGCTTCGTCTTCGTCGCTCG
AAAAGAGCTACGAGCTTCCCGACGGACAGGTTATCACTATTGGTAACGAGAGGTTCCGTT
GCCCAGAGACCATGTTCCAGCCGTCCTTCGTCGGAATGGAATCGTCTGGTGTTCACGAAA
CCACTTACAATTCCATCATGAAGTGCGACATCGACATCCGTAAAGATTTATACGCCAACA
ACGTACTGTCGGGCGGCACCACCATGTACCCAGGTATCGCCGACCGTATGCAAAAAGAGA
TCACCGCACTCGCCCCGGCCACCATGAAGATCAAGATCATCGCCCCGCCCGAGAGGAAAT
ACTCCGTCTGGATCGGAGGCTCCATTCTCGCTTCTCTATCCACCTTCCAACAGATGTGGA
TCACCAAGCAAGAGTACGATGAGTCGGGTCCTTCCATTGTCCACAGAAAATGCTTCTAAT
| PANTHER |
Actin (IPR004000) - T[5-378] 6.1E-267 |
| Pfam |
Actin (IPR004000) - T[7-379] 4.8E-149 |
| SMART |
Actin (IPR004000) - T[9-379] 6.5E-238 |
| PRINTS |
Actin (IPR004000) - T[30-39] 6.8E-58 - T[53-64] 6.8E-58 - T[65-87] 6.8E-58 - T[119-132] 6.8E-58 - T[144-163] 6.8E-58 - T[240-256] 6.8E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[57-67] . - T[360-368] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[108-120] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96 % | 765 | 0 |
| ACTS_HUMAN | 96.8 % | 769 | 0 |
| ACTC_HUMAN | 96.8 % | 769 | 0 |