- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g22496.01.t
Possible name(s)
DDX27; DDX47; DDX54
Gene model
Location
chrUn [146,851,383 / 146,853,642]
Amino acid sequence
Length: 752
>Boschl.CG.Botznik2013.chrUn.g22496.01.p
MAELIQTIEEGEDVFIDEELSDESEDENAKSKQRIKQLKQQKKGFNKDFVFDADDVDTAL
TMKAIMDSIHFKKHVARTSLDEKIAEVRKSRMIKNAHFNVGKTKDENKDVIEEEADATDS
ESELIVPKQDKIRIKKKKGAKDDDLEEEIRQNIKEKKGKLTIEGDISDEEFFASTPHWNP
EMNFAEMNMSRPLLKGISAVNYITPTPIQQATIPVALLGKDICACAATGTGKTAAFMLPV
LERLLFKPRLAPVTRVLCLVPTRELAIQVHSLTRQLAQFTDVQTCLAAGGLDLKSQEAAL
RQGPDVLIATPGRLIDHLHNTPSFQLDSVEILILDEADRMLDEFFAEQMTEIIKLCSANR
QTMLFSATMTEQVNELAAVALKKPVKLFVNSNTEVAPYLRQEFIRIRPNKEGDREAIVAA
LCSRTFVTSVLMFTQTKKQAHRMHIVLGLLGLKVAELHGNLNQAQRLDGLEKFRSAEVDI
LVCTDLAARGLDISNVKTVINFTMPNTIKHYVHRVGRTARAGKTGRSVSLVGESERKMLK
EIVKLAKNPVRSRLVPPAVIERYKTKLEELDPEVGSVLRMEIEEKELMKSEAQLSKGQRI
LQKNPSDPPPEKRNWFQTTIERETVRAERMLGVHSEAKPGKKRSKQKQNFIAPPKNAQER
AAKELEKVQAFQMREKKRKRKPKRMRACHENPGPAKPTKQTKKASSFDAELTNTSSRAVK
KFRANPSYEERKKFGIAKKQRKGSKFGGGRAK
Nucleotide sequence
Length: 2,259
>Boschl.CG.Botznik2013.chrUn.g22496.01.t
TGGCCGAATTAATACAAACTATTGAGGAAGGTGAAGACGTATTCATAGATGAAGAACTGA
GCGATGAAAGTGAGGATGAAAACGCGAAAAGCAAACAACGAATAAAACAGTTGAAACAAC
AGAAAAAGGGTTTCAACAAAGACTTCGTCTTTGATGCCGATGACGTAGACACTGCCTTAA
CTATGAAAGCTATTATGGATTCAATACACTTCAAAAAACACGTAGCCAGGACGTCTTTGG
ATGAGAAAATTGCCGAAGTACGGAAATCCAGGATGATTAAGAATGCTCATTTTAACGTAG
GCAAAACGAAAGATGAAAACAAAGACGTGATCGAAGAAGAAGCAGATGCCACTGACAGCG
AATCCGAATTAATTGTGCCCAAGCAAGACAAAATCCGAATTAAAAAGAAGAAAGGGGCCA
AAGATGACGATCTTGAGGAAGAAATTCGGCAAAACATTAAAGAAAAAAAAGGGAAATTAA
CAATCGAAGGCGACATCAGCGATGAAGAATTTTTTGCTTCGACGCCTCATTGGAATCCCG
AAATGAATTTTGCAGAAATGAATATGTCGCGCCCCCTTCTGAAAGGAATAAGTGCCGTAA
ATTACATCACCCCGACGCCTATTCAACAAGCCACCATTCCTGTTGCTCTTTTAGGTAAAG
ACATATGCGCTTGCGCCGCCACAGGTACTGGGAAAACTGCCGCATTTATGCTTCCGGTTT
TAGAGAGATTGCTCTTCAAACCTCGCTTAGCACCAGTCACAAGAGTTCTGTGTTTGGTTC
CTACTCGAGAATTGGCAATACAGGTGCATTCTCTCACGCGACAACTTGCTCAATTCACCG
ACGTTCAAACATGTCTCGCAGCCGGAGGCCTTGATTTAAAATCGCAGGAGGCCGCCCTAC
GACAGGGTCCGGATGTGTTGATCGCAACTCCCGGACGATTAATAGACCACCTGCATAACA
CTCCCTCTTTTCAGTTGGATTCCGTCGAAATTTTGATTTTGGACGAAGCAGATCGTATGC
TGGACGAATTTTTCGCCGAACAAATGACTGAAATAATCAAATTATGCTCGGCCAATCGAC
AAACGATGTTGTTTTCTGCCACAATGACGGAGCAAGTCAATGAGCTGGCAGCTGTCGCTT
TGAAAAAGCCTGTAAAATTGTTTGTCAATAGTAATACGGAAGTCGCCCCATATTTAAGAC
AAGAGTTTATTAGGATCCGGCCGAATAAAGAAGGAGATCGGGAAGCTATCGTCGCTGCGT
TGTGTTCAAGAACTTTCGTAACCAGTGTTCTGATGTTCACCCAAACGAAAAAACAAGCCC
ACAGAATGCACATCGTTTTGGGTTTGTTAGGTCTTAAAGTAGCCGAACTGCACGGCAATT
TAAATCAGGCCCAAAGGTTGGACGGGCTGGAAAAATTTCGAAGTGCGGAAGTTGATATTC
TAGTGTGTACGGATTTAGCAGCCCGTGGTTTGGATATTAGCAATGTAAAGACGGTTATCA
ATTTCACGATGCCAAACACCATCAAGCATTATGTGCACAGAGTTGGAAGAACTGCCCGCG
CTGGCAAGACGGGGAGATCAGTGTCTCTAGTCGGCGAATCGGAAAGAAAAATGTTAAAAG
AGATTGTGAAATTAGCGAAAAATCCGGTGCGTAGCAGATTGGTGCCTCCAGCGGTTATAG
AACGGTACAAAACTAAATTGGAAGAGCTTGATCCGGAAGTAGGATCAGTCCTGCGAATGG
AAATCGAAGAGAAAGAATTGATGAAATCGGAAGCGCAACTATCGAAAGGACAGAGAATAC
TTCAGAAGAACCCGTCAGACCCGCCTCCGGAAAAGAGAAACTGGTTTCAGACAACGATCG
AACGTGAAACCGTACGCGCAGAACGCATGCTCGGAGTGCATTCGGAAGCGAAACCCGGCA
AAAAGAGATCAAAACAAAAGCAGAATTTCATCGCGCCTCCCAAAAACGCTCAAGAGCGAG
CGGCGAAAGAGCTGGAGAAGGTGCAAGCGTTCCAGATGCGTGAAAAGAAACGAAAAAGAA
AGCCAAAACGGATGCGAGCCTGTCACGAAAATCCGGGGCCTGCGAAACCGACAAAGCAGA
CGAAGAAAGCATCGTCTTTTGATGCGGAACTCACAAACACGTCGTCAAGAGCCGTGAAAA
AGTTCAGGGCCAACCCTAGTTATGAAGAGCGCAAGAAATTCGGTATTGCCAAGAAGCAGC
GTAAAGGATCAAAATTCGGCGGCGGGAGGGCCAAATAGC
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[171-389] 4.98E-64 - T[326-538] 6.58E-47 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[182-210] 10.809 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[201-402] 1.9E-54 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[206-376] 1.1E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[213-387] 29.78 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[333-341] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[398-571] 20.214 |
| CDD |
Helicase_C (IPR001650) - T[403-530] 7.18599E-31 |
| Pfam |
Helicase_C (IPR001650) - T[417-522] 7.5E-27 |
| SMART |
Helicase_C (IPR001650) - T[441-522] 2.7E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 55.495 % | 734 | 0 |
| DDX47_HUMAN | 40.385 % | 268 | 6.54E-82 |
| DDX54_HUMAN | 41.011 % | 253 | 1.36E-72 |
