- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g09169.01.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
chrUn [59,312,539 / 59,319,731]
Amino acid sequence
Length: 352
>Boschl.CG.Botznik2013.chrUn.g09169.01.p
MERTAAVNYNGKRETMPISHHHHPGHQPANVVISDNDSGCSLDEYAWVPMGLNPEQVQAY
FRTLPEDHVPLIDSVGERYRIRQLLQQLPPQDNEVRYCNKLTEEEERELKLFSKQRKQEA
LGRGSARIYSHSAPSTRCENCGSTIKGGDVAIFATRAGTGVCWHPNCFVCSLCKELLVDL
IYFYQDGQLYCGRHHAESLKPRCSACDEIIFSDECTEAEGRHWHMNHFCCYDCEVVLGGQ
RYIMRDEKPYCTRCFEARYAEYCDTCGEMIGLDVGQMQYDGQHWHATEDCFSCMRCNVSL
LGKPFLPKHGQIFCSKACSIGDDQSVSETDSQVRIACLLAGEDAFLALRLAP
Nucleotide sequence
Length: 1,059
>Boschl.CG.Botznik2013.chrUn.g09169.01.t
TATGGAGCGTACTGCGGCTGTTAATTACAACGGGAAACGCGAGACAATGCCAATATCCCA
TCACCACCATCCAGGACATCAGCCCGCTAACGTGGTCATTTCGGATAACGACAGCGGGTG
CTCTTTAGACGAATACGCTTGGGTGCCTATGGGCCTAAACCCGGAACAGGTCCAAGCGTA
TTTTCGAACTTTACCAGAAGACCATGTTCCACTTATCGACAGCGTGGGAGAGAGATACCG
TATTCGTCAATTATTACAACAACTGCCCCCTCAAGATAATGAGGTTCGGTATTGCAATAA
ACTGACCGAGGAAGAGGAAAGAGAATTGAAGCTTTTTAGCAAACAACGAAAGCAGGAAGC
GCTCGGAAGAGGTAGTGCAAGGATATACTCGCACTCCGCGCCGTCTACGCGCTGCGAAAA
GTGCGGCAGCACCATCAAAGGGGGTGACGTGGCGATATTTGCAACGCGAGCCGGAACGGG
AGTTTGCTGGCACCCTAATTGCTTTGTGTGCTCTCTGTGCAAAGAGCTGCTAGTGGATTT
GATTTATTTCTACCAGGACGGACAGCTTTATTGCGGAAGGCATCACGCCGAGAGTCTTAA
GCCGCGATGCTCCGCGTGTGATGAGATCATTTTCTCCGACGAATGCACGGAAGCGGAGGG
CCGCCACTGGCACATGAATCACTTCTGCTGCTACGATTGCGAAGTCGTGCTGGGGGGTCA
ACGGTACATAATGCGAGACGAGAAGCCATACTGCACCCGGTGCTTCGAAGCGAGATACGC
GGAATACTGCGACACTTGCGGGGAGATGATAGGTCTCGACGTCGGCCAAATGCAGTACGA
CGGACAACACTGGCACGCCACCGAAGACTGCTTCTCGTGTATGAGATGCAACGTGTCGCT
GTTGGGAAAACCTTTCCTCCCCAAGCACGGGCAGATATTTTGCTCCAAAGCGTGCAGCAT
CGGCGACGACCAGTCCGTTTCCGAAACCGACTCCCAGGTACGCATCGCGTGTTTACTCGC
CGGCGAAGATGCATTTCTAGCCTTGAGGCTCGCGCCGTA
| ProSiteProfiles |
PET_domain (IPR010442) - T[26-133] 33.019 |
| CDD |
PET_prickle (IPR033723) - T[34-130] 4.72625E-61 |
| Pfam |
PET_domain (IPR010442) - T[44-125] 3.8E-34 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[136-200] 10.524 - T[201-261] 13.088 - T[262-325] 6.792 |
| SMART |
Znf_LIM (IPR001781) - T[137-194] 1.5E-10 - T[202-254] 9.0E-16 - T[262-317] 1.3E-7 |
| CDD |
LIM1_prickle (IPR033725) - T[138-196] 2.12163E-34 |
| Pfam |
Znf_LIM (IPR001781) - T[138-197] 6.5E-12 - T[203-258] 2.4E-11 - T[263-316] 5.9E-6 |
| CDD |
LIM2_prickle (IPR033726) - T[201-256] 3.55293E-33 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[203-237] . |
| CDD |
LIM3_prickle (IPR033727) - T[261-319] 3.53404E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 69.36 % | 464 | 4.07E-158 |
| PRIC1_HUMAN | 68.687 % | 457 | 1.37E-155 |
| PRIC3_HUMAN | 64.966 % | 417 | 1.38E-142 |
