Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g00107.01.t

Possible name(s)

NUP98

Gene model

Boschl.CG.Botznik2013.chrUn.g00107

Location

chrUn [541,642 / 543,516]

Sequences

Amino acid sequence

Length: 111

>Boschl.CG.Botznik2013.chrUn.g00107.01.p
MVKPIIFRFMSSMTQTGTGAIKFNPPTNTDTMMRSGVQTTINTKHQCITAMKEYEAKSFE
ELRAEDYTAGRKGGGGNKSAFGASASTAASGGFTFGATNSNTSGGLFGQQK

Nucleotide sequence

Length: 335

>Boschl.CG.Botznik2013.chrUn.g00107.01.t
CATGGTAAAACCTATTATTTTTCGCTTTATGTCCAGTATGACCCAGACTGGTACCGGTGC
CATCAAGTTCAACCCTCCTACCAATACTGACACGATGATGCGAAGCGGTGTGCAGACGAC
GATCAACACCAAGCATCAATGTATCACCGCCATGAAAGAATATGAAGCTAAGAGTTTTGA
GGAACTCCGTGCCGAAGATTACACGGCTGGTAGAAAAGGTGGAGGTGGGAATAAGTCTGC
ATTTGGAGCCTCCGCATCGACCGCAGCTTCTGGTGGTTTTACGTTTGGAGCAACCAATTC
AAATACTTCCGGCGGCCTGTTTGGACAGCAAAAGG

InterProScan

PANTHER	NUP98-NUP96 (IPR037637) - T[14-110] 3.6E-28
PANTHER	Nucleoporin_S59-like (IPR037665) - T[14-110] 3.6E-28

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NUP98_HUMAN	50.394 %	103	3.03E-27