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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g47789.01.t

Possible name(s)

FARP1; FARP2; FGD6

Location

chr7 [4,764,311 / 4,779,280]

Sequences

Amino acid sequence

Length: 346

>Boschl.CG.Botznik2013.chr7.g47789.01.p
LCQAYTKSGQFAEHQELQSVGNELAEICNALRDRLQQAHNYQKLAQLRHDLIGVDNLSLS
DRDFVREGSLYKLSRKGFQQRLFFLFSGCLLYTSKGVTSSNQFKIHGELPLKGMIIEINE
SDKTVPNCFSIISGTKTVVVAAASPEEMTKWIEDLNHHITLCKDAPGDYRPISKTARPLS
GQSTDQSDDSNSSRNSLDQNGDRSSNQQRSNTTMHVCWHRNTSVSSDDYFVSLQNQLCGY
LLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDEFPLASLPLLGYSATAPSPNDGIQKDFVF
KLQFKTHVYFFRAESEYTYSRWMEVIRSATGNAKRVRLFSRMESCK

Nucleotide sequence

Length: 1,043

>Boschl.CG.Botznik2013.chr7.g47789.01.t
TCTGTGCCAAGCTTACACGAAGTCTGGACAGTTCGCAGAGCACCAAGAACTGCAGTCCGT
CGGGAATGAGCTAGCAGAAATTTGCAATGCCCTAAGAGACAGGCTTCAACAAGCTCACAA
CTATCAGAAACTTGCTCAACTGCGACACGACCTCATTGGCGTGGATAATCTTTCTTTGAG
CGATAGGGACTTTGTCCGCGAAGGCAGTTTGTACAAGCTGTCCAGAAAAGGCTTCCAGCA
AAGGCTGTTTTTCTTGTTTTCTGGCTGCCTGCTCTACACTAGCAAAGGAGTGACGTCGAG
CAACCAGTTCAAGATCCATGGCGAACTGCCGCTCAAAGGGATGATCGTCGAAATTAACGA
AAGTGACAAAACGGTGCCTAACTGCTTCAGCATCATTTCGGGGACCAAAACGGTGGTGGT
GGCCGCGGCCAGTCCCGAAGAGATGACAAAATGGATCGAGGACCTCAACCACCACATCAC
TCTGTGTAAGGATGCGCCCGGCGATTACCGACCCATAAGCAAGACTGCAAGACCTCTAAG
CGGCCAATCCACGGACCAATCGGACGACTCCAACTCGTCACGTAATTCGCTTGATCAAAA
CGGCGACCGTTCCAGCAATCAGCAAAGGAGCAACACAACGATGCACGTGTGTTGGCACAG
GAATACAAGCGTTAGCTCAGATGACTATTTCGTTTCGCTACAGGACCAGCTTTGCGGGTA
TCTTTTGAGGAAATTCAAGAATTCCAATGGATGGCAAAAGCTGTGGGTGGTGTTCACGAA
TTTTTGCCTTTTCTTTTATAAATCTCATCAGGATGAATTTCCGCTCGCCAGTTTGCCTCT
TCTGGGCTATTCCGCGACGGCGCCTTCTCCCAACGACGGCATTCAGAAAGACTTTGTTTT
CAAACTTCAATTCAAGACTCACGTTTACTTCTTCCGAGCCGAGAGCGAATACACCTACTC
GAGGTGGATGGAGGTAATCCGTAGTGCCACCGGCAACGCCAAAAGAGTTCGTCTCTTCAG
TCGCATGGAGAGCTGCAAATGAT

InterProScan

ProSiteProfiles
PH_domain (IPR001849) - T[63-160] 14.641 - T[234-331] 13.324
SMART
PH_domain (IPR001849) - T[64-162] 1.1E-19 - T[235-333] 1.1E-17
Pfam
PH_domain (IPR001849) - T[65-159] 1.2E-13 - T[237-329] 1.2E-13
Gene3D
PH-like_dom_sf (IPR011993) - T[233-334] 4.3E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FARP2_HUMAN 54.037 % 360 2.91E-116
FARP1_HUMAN 52.422 % 370 3.04E-120
FGD6_HUMAN 32.237 % 80.5 1.65E-16