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  1. Transcript 'KH2012:KH.C2.520.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.520.v2.A.nonSL4-1

Possible name(s)

CWC22; NOM1

Location

KhC2 [2,653,691 / 2,658,201]

Sequences

Amino acid sequence

Length: 606

>KH.C2.520.v2.A.nonSL4-1
HNNNVVSILISLSNCLLLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGY
DKPSATLGRKERRRQMKKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGAT
KRKRKRAKLLEKQEEFVREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIG
QGETESGLNDLKNETKNYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDA
SDEPDEEDLVEEDEMGSDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGK
YVPPALRRNMSEKENEKRRKLERQIKGWLNRLTESEILPDVSFQDLVDAETKGRWWIVGS
SWKGVPMLKKSTETTVEVDTNVSSQLIEAARKLRMNTDVRRGIFYAIMSAEDYMDAFERV
VKMGLKGKQLREISHVVVECCIQQRSFNLFYYHLLNKFCLYNREFIMTTQCTFWDKFKLL
ASYSKMQLSNLSSLVSSLLLSQALPLACLKTLEYTEMDKPMVSFLRQVLIRISRSENADS
KISEIFPKLGSSKHSLVRQGLKLFIQHFMLGDANFMKEHEDIKDCLTNMDNKLVSSKQSS
IFGGVC

Nucleotide sequence

Length: 1,935

>KH2012:KH.C2.520.v2.A.nonSL4-1
GCACAATAACAACGTGGTTTCGATTCTTATATCATTATCGAATTGTTTATTACTTACTTC
GGTATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGATGAGGTTTAACAC
AATTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGGAAAGGATGGTTA
CGATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAATGAAAAAACAGCG
TAAGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCTGGTAAAATCACA
GCCGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGAAAGTGGGGCAAC
AAAACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTTTGTGAGGGAAGA
CAATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAAAATAAAGAAGAA
AAAGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACTTGATGTTATTGG
ACAAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAAGAACTATGAGGA
TGGTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGAGGGGGACGATCA
GGATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGATTTTGATGATGC
GAGTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGGAAGTGATGCTGG
TTGGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATCTGTTATTGATGA
TGAAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAGTATCAGTGGAAA
ATATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGAAAAACGAAGAAA
ACTTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAACAGAATCAGAAATTTTGCCAGA
TGTATCATTTCAGGATCTGGTTGATGCGGAGACAAAAGGAAGATGGTGGATCGTGGGAAG
TTCATGGAAAGGAGTTCCGATGCTAAAGAAGTCAACGGAAACTACTGTAGAAGTTGACAC
CAACGTCAGTTCCCAGTTGATAGAAGCAGCTCGTAAATTAAGAATGAATACTGATGTTCG
TAGGGGAATATTTTACGCTATTATGTCAGCTGAGGATTACATGGATGCCTTTGAAAGAGT
GGTAAAGATGGGTTTAAAGGGAAAACAACTTCGTGAGATTAGTCATGTTGTTGTGGAATG
TTGTATTCAACAAAGATCATTCAACCTCTTCTATTATCATCTACTGAATAAATTCTGTCT
TTATAACAGAGAATTCATAATGACAACACAATGTACATTCTGGGATAAGTTTAAACTTCT
TGCCTCGTACAGTAAAATGCAACTTTCGAATCTATCAAGTTTAGTTTCAAGTTTGCTTCT
TTCGCAAGCACTTCCACTTGCATGTCTGAAGACACTTGAGTACACGGAAATGGACAAACC
AATGGTTTCATTTTTACGTCAGGTTTTAATTCGGATATCAAGATCAGAAAATGCAGATTC
TAAAATAAGTGAGATTTTCCCGAAACTTGGATCTAGCAAGCACTCCCTGGTTCGTCAAGG
ATTAAAACTTTTTATTCAACATTTTATGCTCGGTGATGCTAATTTCATGAAAGAACATGA
AGATATAAAAGACTGTTTAACAAACATGGATAATAAACTCGTGTCTTCAAAGCAATCATC
AATTTTTGGTGGAGTGTGTTAATACTGTTGTGAACTTGTGGTTACCGAATTTTTTGTTCT
GTTTTACAATTATGTGTTGGTATATGTATTACTATTATGTATTGGTCCAGTTTGATATAT
CTGGACTTTTGACAG

InterProScan

Gene3D
MIF4-like_sf (IPR016021) - T[289-352] 6.7E-9
ProSiteProfiles
Initiation_fac_eIF4g_MI (IPR003891) - T[398-514] 17.684
SMART
Initiation_fac_eIF4g_MI (IPR003891) - T[399-505] 3.6E-9
Pfam
Initiation_fac_eIF4g_MI (IPR003891) - T[399-505] 3.5E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOM1_HUMAN 44.828 % 235 2.13E-67