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  1. Transcript 'KH2012:KH.C2.520.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.520.v2.A.nonSL2-1

Possible name(s)

CWC22; NOM1

Location

KhC2 [2,653,739 / 2,658,201]

Sequences

Amino acid sequence

Length: 590

>KH.C2.520.v2.A.nonSL2-1
LLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGYDKPSATLGRKERRRQM
KKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGATKRKRKRAKLLEKQEEF
VREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIGQGETESGLNDLKNETK
NYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDASDEPDEEDLVEEDEMG
SDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGKYVPPALRRNMSEKENE
KRRKLERQIKGWLNRLTESEILPDVSFQDLVDAETKGRWWIVGSSWKGVPMLKKSTETTV
EVDTNVSSQLIEAARKLRMNTDVRRGIFYAIMSAEDYMDAFERVVKMGLKGKQLREISHV
VVECCIQQRSFNLFYYHLLNKFCLYNREFIMTTQCTFWDKFKLLASYSKMQLSNLSSLVS
SLLLSQALPLACLKTLEYTEMDKPMVSFLRQVLIRISRSENADSKISEIFPKLGSSKHSL
VRQGLKLFIQHFMLGDANFMKEHEDIKDCLTNMDNKLVSSKQSSIFGGVC

Nucleotide sequence

Length: 1,887

>KH2012:KH.C2.520.v2.A.nonSL2-1
ATTACTTACTTCGGTATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGAT
GAGGTTTAACACAATTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGG
AAAGGATGGTTACGATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAAT
GAAAAAACAGCGTAAGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCT
GGTAAAATCACAGCCGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGA
AAGTGGGGCAACAAAACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTT
TGTGAGGGAAGACAATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAA
AATAAAGAAGAAAAAGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACT
TGATGTTATTGGACAAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAA
GAACTATGAGGATGGTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGA
GGGGGACGATCAGGATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGA
TTTTGATGATGCGAGTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGG
AAGTGATGCTGGTTGGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATC
TGTTATTGATGATGAAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAG
TATCAGTGGAAAATATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGA
AAAACGAAGAAAACTTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAACAGAATCAGA
AATTTTGCCAGATGTATCATTTCAGGATCTGGTTGATGCGGAGACAAAAGGAAGATGGTG
GATCGTGGGAAGTTCATGGAAAGGAGTTCCGATGCTAAAGAAGTCAACGGAAACTACTGT
AGAAGTTGACACCAACGTCAGTTCCCAGTTGATAGAAGCAGCTCGTAAATTAAGAATGAA
TACTGATGTTCGTAGGGGAATATTTTACGCTATTATGTCAGCTGAGGATTACATGGATGC
CTTTGAAAGAGTGGTAAAGATGGGTTTAAAGGGAAAACAACTTCGTGAGATTAGTCATGT
TGTTGTGGAATGTTGTATTCAACAAAGATCATTCAACCTCTTCTATTATCATCTACTGAA
TAAATTCTGTCTTTATAACAGAGAATTCATAATGACAACACAATGTACATTCTGGGATAA
GTTTAAACTTCTTGCCTCGTACAGTAAAATGCAACTTTCGAATCTATCAAGTTTAGTTTC
AAGTTTGCTTCTTTCGCAAGCACTTCCACTTGCATGTCTGAAGACACTTGAGTACACGGA
AATGGACAAACCAATGGTTTCATTTTTACGTCAGGTTTTAATTCGGATATCAAGATCAGA
AAATGCAGATTCTAAAATAAGTGAGATTTTCCCGAAACTTGGATCTAGCAAGCACTCCCT
GGTTCGTCAAGGATTAAAACTTTTTATTCAACATTTTATGCTCGGTGATGCTAATTTCAT
GAAAGAACATGAAGATATAAAAGACTGTTTAACAAACATGGATAATAAACTCGTGTCTTC
AAAGCAATCATCAATTTTTGGTGGAGTGTGTTAATACTGTTGTGAACTTGTGGTTACCGA
ATTTTTTGTTCTGTTTTACAATTATGTGTTGGTATATGTATTACTATTATGTATTGGTCC
AGTTTGATATATCTGGACTTTTGACAG

InterProScan

Gene3D
MIF4-like_sf (IPR016021) - T[273-336] 6.5E-9
ProSiteProfiles
Initiation_fac_eIF4g_MI (IPR003891) - T[382-498] 17.684
Pfam
Initiation_fac_eIF4g_MI (IPR003891) - T[383-489] 3.3E-17
SMART
Initiation_fac_eIF4g_MI (IPR003891) - T[383-489] 3.6E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOM1_HUMAN 44.828 % 235 1.14E-67