- Transcript 'KH2012:KH.C2.520.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.520.v1.A.nonSL5-1
Possible name(s)
CWC22; NOM1
Gene model
Location
KhC2 [2,653,693 / 2,658,201]
Amino acid sequence
Length: 816
>KH.C2.520.v1.A.nonSL5-1
NNNVVSILISLSNCLLLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGYD
KPSATLGRKERRRQMKKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGATK
RKRKRAKLLEKQEEFVREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIGQ
GETESGLNDLKNETKNYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDAS
DEPDEEDLVEEDEMGSDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGKY
VPPALRRNMSEKENEKRRKLERQIKGWLNRLSESNLGMICSEICAIYQVNSRAFVTEILT
DVILVQFFTPDPIPERLITESSMLIGVLCHNIGVEVVAHFIEAACRKLGKIFLMQNYGKG
KECNNIVQLLCSLYQVRTMQTQIVLDLIEKFIVGFTEKDIELLVLVLKNVGFQLRKDNPI
LLKEIVEKITKQSQELTQDNSSRMKYMLEVLTAIKNNNVRKVTEYDVELLNNRRKKIKLL
IKAESEILPDVSFQDLVDAETKGRWWIVGSSWKGVPMLKKSTETTVEVDTNVSSQLIEAA
RKLRMNTDVRRGIFYAIMSAEDYMDAFERVVKMGLKGKQLREISHVVVECCIQQRSFNLF
YYHLLNKFCLYNREFIMTTQCTFWDKFKLLASYSKMQLSNLSSLVSSLLLSQALPLACLK
TLEYTEMDKPMVSFLRQVLIRISRSENADSKISEIFPKLGSSKHSLVRQGLKLFIQHFML
GDANFMKEHEDIKDCLTNMDNKLVSSKQSSIFGGVC
Nucleotide sequence
Length: 2,566
>KH2012:KH.C2.520.v1.A.nonSL5-1
ACAATAACAACGTGGTTTCGATTCTTATATCATTATCGAATTGTTTATTACTTACTTCGG
TATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGATGAGGTTTAACACAA
TTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGGAAAGGATGGTTACG
ATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAATGAAAAAACAGCGTA
AGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCTGGTAAAATCACAGC
CGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGAAAGTGGGGCAACAA
AACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTTTGTGAGGGAAGACA
ATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAAAATAAAGAAGAAAA
AGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACTTGATGTTATTGGAC
AAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAAGAACTATGAGGATG
GTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGAGGGGGACGATCAGG
ATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGATTTTGATGATGCGA
GTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGGAAGTGATGCTGGTT
GGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATCTGTTATTGATGATG
AAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAGTATCAGTGGAAAAT
ATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGAAAAACGAAGAAAAC
TTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAAGTGAGTCAAATCTGGGAATGATTT
GTTCTGAAATTTGTGCCATCTATCAAGTAAATAGTCGAGCGTTTGTAACTGAGATATTGA
CAGATGTAATATTGGTACAGTTTTTCACTCCCGACCCAATACCAGAGCGACTTATAACAG
AATCCTCAATGTTAATTGGTGTCCTTTGTCATAACATTGGTGTGGAGGTGGTGGCCCATT
TTATTGAGGCAGCATGCAGAAAACTGGGCAAAATTTTTTTGATGCAAAATTATGGAAAAG
GAAAGGAATGTAACAACATTGTGCAACTTCTCTGTAGTTTGTACCAAGTGCGAACTATGC
AGACACAGATTGTTTTGGATTTAATAGAGAAGTTTATTGTTGGTTTCACTGAAAAGGACA
TTGAACTTCTGGTGCTTGTGTTAAAAAATGTTGGTTTTCAATTAAGAAAAGATAATCCTA
TTCTACTGAAAGAAATAGTGGAAAAAATTACCAAACAATCCCAAGAATTAACACAAGATA
ATTCTTCTAGAATGAAATACATGCTTGAGGTTTTGACTGCGATTAAAAACAACAATGTTC
GAAAAGTAACAGAATACGATGTAGAACTTTTAAACAACAGAAGAAAGAAAATCAAACTTT
TAATTAAAGCAGAATCAGAAATTTTGCCAGATGTATCATTTCAGGATCTGGTTGATGCGG
AGACAAAAGGAAGATGGTGGATCGTGGGAAGTTCATGGAAAGGAGTTCCGATGCTAAAGA
AGTCAACGGAAACTACTGTAGAAGTTGACACCAACGTCAGTTCCCAGTTGATAGAAGCAG
CTCGTAAATTAAGAATGAATACTGATGTTCGTAGGGGAATATTTTACGCTATTATGTCAG
CTGAGGATTACATGGATGCCTTTGAAAGAGTGGTAAAGATGGGTTTAAAGGGAAAACAAC
TTCGTGAGATTAGTCATGTTGTTGTGGAATGTTGTATTCAACAAAGATCATTCAACCTCT
TCTATTATCATCTACTGAATAAATTCTGTCTTTATAACAGAGAATTCATAATGACAACAC
AATGTACATTCTGGGATAAGTTTAAACTTCTTGCCTCGTACAGTAAAATGCAACTTTCGA
ATCTATCAAGTTTAGTTTCAAGTTTGCTTCTTTCGCAAGCACTTCCACTTGCATGTCTGA
AGACACTTGAGTACACGGAAATGGACAAACCAATGGTTTCATTTTTACGTCAGGTTTTAA
TTCGGATATCAAGATCAGAAAATGCAGATTCTAAAATAAGTGAGATTTTCCCGAAACTTG
GATCTAGCAAGCACTCCCTGGTTCGTCAAGGATTAAAACTTTTTATTCAACATTTTATGC
TCGGTGATGCTAATTTCATGAAAGAACATGAAGATATAAAAGACTGTTTAACAAACATGG
ATAATAAACTCGTGTCTTCAAAGCAATCATCAATTTTTGGTGGAGTGTGTTAATACTGTT
GTGAACTTGTGGTTACCGAATTTTTTGTTCTGTTTTACAATTATGTGTTGGTATATGTAT
TACTATTATGTATTGGTCCAGTTTGATATATCTGGACTTTTGACAG
| Gene3D |
MIF4-like_sf (IPR016021) - T[288-562] 9.2E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[311-519] 2.19E-23 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[321-518] 1.5E-9 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[322-518] 1.7E-12 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[608-724] 17.684 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[609-715] 3.6E-9 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[609-715] 5.4E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 41.604 % | 409 | 2.97E-130 |
