- Transcript 'KH2012:KH.C2.520.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.520.v1.A.nonSL4-1
Possible name(s)
CWC22; NOM1
Gene model
Location
KhC2 [2,653,691 / 2,658,201]
Amino acid sequence
Length: 817
>KH.C2.520.v1.A.nonSL4-1
HNNNVVSILISLSNCLLLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGY
DKPSATLGRKERRRQMKKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGAT
KRKRKRAKLLEKQEEFVREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIG
QGETESGLNDLKNETKNYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDA
SDEPDEEDLVEEDEMGSDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGK
YVPPALRRNMSEKENEKRRKLERQIKGWLNRLSESNLGMICSEICAIYQVNSRAFVTEIL
TDVILVQFFTPDPIPERLITESSMLIGVLCHNIGVEVVAHFIEAACRKLGKIFLMQNYGK
GKECNNIVQLLCSLYQVRTMQTQIVLDLIEKFIVGFTEKDIELLVLVLKNVGFQLRKDNP
ILLKEIVEKITKQSQELTQDNSSRMKYMLEVLTAIKNNNVRKVTEYDVELLNNRRKKIKL
LIKAESEILPDVSFQDLVDAETKGRWWIVGSSWKGVPMLKKSTETTVEVDTNVSSQLIEA
ARKLRMNTDVRRGIFYAIMSAEDYMDAFERVVKMGLKGKQLREISHVVVECCIQQRSFNL
FYYHLLNKFCLYNREFIMTTQCTFWDKFKLLASYSKMQLSNLSSLVSSLLLSQALPLACL
KTLEYTEMDKPMVSFLRQVLIRISRSENADSKISEIFPKLGSSKHSLVRQGLKLFIQHFM
LGDANFMKEHEDIKDCLTNMDNKLVSSKQSSIFGGVC
Nucleotide sequence
Length: 2,568
>KH2012:KH.C2.520.v1.A.nonSL4-1
GCACAATAACAACGTGGTTTCGATTCTTATATCATTATCGAATTGTTTATTACTTACTTC
GGTATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGATGAGGTTTAACAC
AATTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGGAAAGGATGGTTA
CGATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAATGAAAAAACAGCG
TAAGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCTGGTAAAATCACA
GCCGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGAAAGTGGGGCAAC
AAAACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTTTGTGAGGGAAGA
CAATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAAAATAAAGAAGAA
AAAGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACTTGATGTTATTGG
ACAAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAAGAACTATGAGGA
TGGTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGAGGGGGACGATCA
GGATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGATTTTGATGATGC
GAGTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGGAAGTGATGCTGG
TTGGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATCTGTTATTGATGA
TGAAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAGTATCAGTGGAAA
ATATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGAAAAACGAAGAAA
ACTTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAAGTGAGTCAAATCTGGGAATGAT
TTGTTCTGAAATTTGTGCCATCTATCAAGTAAATAGTCGAGCGTTTGTAACTGAGATATT
GACAGATGTAATATTGGTACAGTTTTTCACTCCCGACCCAATACCAGAGCGACTTATAAC
AGAATCCTCAATGTTAATTGGTGTCCTTTGTCATAACATTGGTGTGGAGGTGGTGGCCCA
TTTTATTGAGGCAGCATGCAGAAAACTGGGCAAAATTTTTTTGATGCAAAATTATGGAAA
AGGAAAGGAATGTAACAACATTGTGCAACTTCTCTGTAGTTTGTACCAAGTGCGAACTAT
GCAGACACAGATTGTTTTGGATTTAATAGAGAAGTTTATTGTTGGTTTCACTGAAAAGGA
CATTGAACTTCTGGTGCTTGTGTTAAAAAATGTTGGTTTTCAATTAAGAAAAGATAATCC
TATTCTACTGAAAGAAATAGTGGAAAAAATTACCAAACAATCCCAAGAATTAACACAAGA
TAATTCTTCTAGAATGAAATACATGCTTGAGGTTTTGACTGCGATTAAAAACAACAATGT
TCGAAAAGTAACAGAATACGATGTAGAACTTTTAAACAACAGAAGAAAGAAAATCAAACT
TTTAATTAAAGCAGAATCAGAAATTTTGCCAGATGTATCATTTCAGGATCTGGTTGATGC
GGAGACAAAAGGAAGATGGTGGATCGTGGGAAGTTCATGGAAAGGAGTTCCGATGCTAAA
GAAGTCAACGGAAACTACTGTAGAAGTTGACACCAACGTCAGTTCCCAGTTGATAGAAGC
AGCTCGTAAATTAAGAATGAATACTGATGTTCGTAGGGGAATATTTTACGCTATTATGTC
AGCTGAGGATTACATGGATGCCTTTGAAAGAGTGGTAAAGATGGGTTTAAAGGGAAAACA
ACTTCGTGAGATTAGTCATGTTGTTGTGGAATGTTGTATTCAACAAAGATCATTCAACCT
CTTCTATTATCATCTACTGAATAAATTCTGTCTTTATAACAGAGAATTCATAATGACAAC
ACAATGTACATTCTGGGATAAGTTTAAACTTCTTGCCTCGTACAGTAAAATGCAACTTTC
GAATCTATCAAGTTTAGTTTCAAGTTTGCTTCTTTCGCAAGCACTTCCACTTGCATGTCT
GAAGACACTTGAGTACACGGAAATGGACAAACCAATGGTTTCATTTTTACGTCAGGTTTT
AATTCGGATATCAAGATCAGAAAATGCAGATTCTAAAATAAGTGAGATTTTCCCGAAACT
TGGATCTAGCAAGCACTCCCTGGTTCGTCAAGGATTAAAACTTTTTATTCAACATTTTAT
GCTCGGTGATGCTAATTTCATGAAAGAACATGAAGATATAAAAGACTGTTTAACAAACAT
GGATAATAAACTCGTGTCTTCAAAGCAATCATCAATTTTTGGTGGAGTGTGTTAATACTG
TTGTGAACTTGTGGTTACCGAATTTTTTGTTCTGTTTTACAATTATGTGTTGGTATATGT
ATTACTATTATGTATTGGTCCAGTTTGATATATCTGGACTTTTGACAG
| Gene3D |
MIF4-like_sf (IPR016021) - T[289-563] 9.2E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[312-520] 2.19E-23 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[322-519] 1.5E-9 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[323-519] 1.7E-12 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[609-725] 17.684 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[610-716] 5.5E-17 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[610-716] 3.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 41.604 % | 409 | 3.05E-130 |
