- Transcript 'KH2012:KH.C2.520.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.520.v1.A.nonSL2-1
Possible name(s)
CWC22; NOM1
Gene model
Location
KhC2 [2,653,739 / 2,658,201]
Amino acid sequence
Length: 801
>KH.C2.520.v1.A.nonSL2-1
LLTSVSTIIMRRRNHDKGKMRFNTIVKNVISDFGEEANEGKDGYDKPSATLGRKERRRQM
KKQRKSRQMEPVEHVVATELVKSQPPKNPFKKTRQKRKPESGATKRKRKRAKLLEKQEEF
VREDNTEDDRTIQNIEKLMKIKKKKTLPSAFASDGLDFLLDVIGQGETESGLNDLKNETK
NYEDGDVIHHSDGLDSDDEEGDDQDEDILDDVLSDVPEEDFDDASDEPDEEDLVEEDEMG
SDAGWVNEVESEDVSEEEASVIDDEENNAVVVKPVETEESISGKYVPPALRRNMSEKENE
KRRKLERQIKGWLNRLSESNLGMICSEICAIYQVNSRAFVTEILTDVILVQFFTPDPIPE
RLITESSMLIGVLCHNIGVEVVAHFIEAACRKLGKIFLMQNYGKGKECNNIVQLLCSLYQ
VRTMQTQIVLDLIEKFIVGFTEKDIELLVLVLKNVGFQLRKDNPILLKEIVEKITKQSQE
LTQDNSSRMKYMLEVLTAIKNNNVRKVTEYDVELLNNRRKKIKLLIKAESEILPDVSFQD
LVDAETKGRWWIVGSSWKGVPMLKKSTETTVEVDTNVSSQLIEAARKLRMNTDVRRGIFY
AIMSAEDYMDAFERVVKMGLKGKQLREISHVVVECCIQQRSFNLFYYHLLNKFCLYNREF
IMTTQCTFWDKFKLLASYSKMQLSNLSSLVSSLLLSQALPLACLKTLEYTEMDKPMVSFL
RQVLIRISRSENADSKISEIFPKLGSSKHSLVRQGLKLFIQHFMLGDANFMKEHEDIKDC
LTNMDNKLVSSKQSSIFGGVC
Nucleotide sequence
Length: 2,520
>KH2012:KH.C2.520.v1.A.nonSL2-1
ATTACTTACTTCGGTATCTACAATTATAATGAGGAGACGAAACCATGATAAAGGCAAGAT
GAGGTTTAACACAATTGTAAAAAACGTGATAAGCGATTTTGGAGAGGAGGCGAACGAAGG
AAAGGATGGTTACGATAAACCCTCAGCGACTCTTGGTCGAAAAGAACGCAGAAGACAAAT
GAAAAAACAGCGTAAGAGTCGTCAAATGGAGCCTGTTGAGCACGTTGTAGCGACAGAGCT
GGTAAAATCACAGCCGCCTAAAAACCCCTTTAAAAAAACTAGACAAAAACGAAAACCGGA
AAGTGGGGCAACAAAACGGAAGCGAAAGCGAGCGAAACTTCTTGAAAAACAAGAAGAGTT
TGTGAGGGAAGACAATACTGAAGATGATAGGACAATCCAAAACATTGAAAAGTTGATGAA
AATAAAGAAGAAAAAGACACTTCCATCAGCATTTGCAAGTGACGGATTGGATTTTCTACT
TGATGTTATTGGACAAGGAGAAACTGAAAGCGGATTAAACGATCTTAAAAATGAAACAAA
GAACTATGAGGATGGTGATGTCATCCATCACAGTGATGGTCTTGATAGTGATGATGAGGA
GGGGGACGATCAGGATGAAGATATCTTGGATGATGTTTTGTCAGATGTGCCGGAGGAGGA
TTTTGATGATGCGAGTGATGAACCAGATGAGGAGGATTTGGTTGAAGAAGATGAGATGGG
AAGTGATGCTGGTTGGGTGAATGAAGTTGAAAGTGAAGATGTTAGTGAAGAAGAAGCATC
TGTTATTGATGATGAAGAAAATAATGCTGTTGTTGTAAAACCAGTTGAAACTGAGGAAAG
TATCAGTGGAAAATATGTTCCACCTGCCTTGAGACGGAATATGTCAGAAAAGGAAAACGA
AAAACGAAGAAAACTTGAGCGGCAAATCAAAGGATGGTTGAACAGATTAAGTGAGTCAAA
TCTGGGAATGATTTGTTCTGAAATTTGTGCCATCTATCAAGTAAATAGTCGAGCGTTTGT
AACTGAGATATTGACAGATGTAATATTGGTACAGTTTTTCACTCCCGACCCAATACCAGA
GCGACTTATAACAGAATCCTCAATGTTAATTGGTGTCCTTTGTCATAACATTGGTGTGGA
GGTGGTGGCCCATTTTATTGAGGCAGCATGCAGAAAACTGGGCAAAATTTTTTTGATGCA
AAATTATGGAAAAGGAAAGGAATGTAACAACATTGTGCAACTTCTCTGTAGTTTGTACCA
AGTGCGAACTATGCAGACACAGATTGTTTTGGATTTAATAGAGAAGTTTATTGTTGGTTT
CACTGAAAAGGACATTGAACTTCTGGTGCTTGTGTTAAAAAATGTTGGTTTTCAATTAAG
AAAAGATAATCCTATTCTACTGAAAGAAATAGTGGAAAAAATTACCAAACAATCCCAAGA
ATTAACACAAGATAATTCTTCTAGAATGAAATACATGCTTGAGGTTTTGACTGCGATTAA
AAACAACAATGTTCGAAAAGTAACAGAATACGATGTAGAACTTTTAAACAACAGAAGAAA
GAAAATCAAACTTTTAATTAAAGCAGAATCAGAAATTTTGCCAGATGTATCATTTCAGGA
TCTGGTTGATGCGGAGACAAAAGGAAGATGGTGGATCGTGGGAAGTTCATGGAAAGGAGT
TCCGATGCTAAAGAAGTCAACGGAAACTACTGTAGAAGTTGACACCAACGTCAGTTCCCA
GTTGATAGAAGCAGCTCGTAAATTAAGAATGAATACTGATGTTCGTAGGGGAATATTTTA
CGCTATTATGTCAGCTGAGGATTACATGGATGCCTTTGAAAGAGTGGTAAAGATGGGTTT
AAAGGGAAAACAACTTCGTGAGATTAGTCATGTTGTTGTGGAATGTTGTATTCAACAAAG
ATCATTCAACCTCTTCTATTATCATCTACTGAATAAATTCTGTCTTTATAACAGAGAATT
CATAATGACAACACAATGTACATTCTGGGATAAGTTTAAACTTCTTGCCTCGTACAGTAA
AATGCAACTTTCGAATCTATCAAGTTTAGTTTCAAGTTTGCTTCTTTCGCAAGCACTTCC
ACTTGCATGTCTGAAGACACTTGAGTACACGGAAATGGACAAACCAATGGTTTCATTTTT
ACGTCAGGTTTTAATTCGGATATCAAGATCAGAAAATGCAGATTCTAAAATAAGTGAGAT
TTTCCCGAAACTTGGATCTAGCAAGCACTCCCTGGTTCGTCAAGGATTAAAACTTTTTAT
TCAACATTTTATGCTCGGTGATGCTAATTTCATGAAAGAACATGAAGATATAAAAGACTG
TTTAACAAACATGGATAATAAACTCGTGTCTTCAAAGCAATCATCAATTTTTGGTGGAGT
GTGTTAATACTGTTGTGAACTTGTGGTTACCGAATTTTTTGTTCTGTTTTACAATTATGT
GTTGGTATATGTATTACTATTATGTATTGGTCCAGTTTGATATATCTGGACTTTTGACAG
| Gene3D |
MIF4-like_sf (IPR016021) - T[273-547] 8.8E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[296-504] 2.73E-23 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[306-503] 1.5E-9 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[307-503] 1.6E-12 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[593-709] 17.684 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[594-700] 3.6E-9 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[594-700] 5.3E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 41.604 % | 409 | 2.24E-130 |
