- Transcript 'KH2012:KH.L153.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.L153.7.v1.R.SL1-1
Possible name(s)
ZNF235; ZNF85
Gene model
Location
KhL153 [565,780 / 569,165]
Amino acid sequence
Length: 427
>KH.L153.7.v1.R.SL1-1
CKTAGCILLTGPRNWKNMARAKLKRQVKIKQEKEEYEYPCKKCDRVFKKVGHLKLHMRGH
RNKKTLTCNVCDKTFSQSYHVVIHMRQHTGEKPFHCNVCDKAFTDKSNYLNHRRVHTGEK
PYKCDLCSKAYSESGPLRIHRRVHTGERPFPCGLCEKAFASQARLRVHCRVHTGEKPYKC
EFCEKCFAQNGTLRAHRRIHLGEKPYKCEFCDRAFTEDLKRHERVHTGERPFKCDTCDKA
FKQKIDLIRHTNVHLKEKPFICNICDKGFSVKSVLSVHLRIHSEKRPYVCDFCPKAFRQI
GNLKRHHLTHTKEKPHKCFACDAAFADLRSMKIHRMIHTGEKPHKCNTCEAAFMNVRSLK
KHQKIHVEKKRYICEVCEKSFSLLNTLKNHRRIHTGEKPFKCKTCNRAFAGQSNMQRHSK
IHLNETT
Nucleotide sequence
Length: 1,303
>KH2012:KH.L153.7.v1.R.SL1-1
GCTTGATATTTTAATAATGCAAAACTGCAGGTTGCATATTATTAACTGGACCTAGAAACT
GGAAAAATATGGCCAGAGCAAAACTCAAACGGCAAGTGAAAATAAAGCAAGAAAAAGAAG
AATATGAATACCCATGTAAAAAGTGTGACAGGGTTTTCAAAAAAGTCGGTCACCTAAAAT
TGCACATGAGGGGACATAGGAATAAAAAGACTCTAACTTGTAATGTGTGTGATAAAACGT
TTTCACAAAGTTATCACGTCGTTATACATATGAGGCAGCACACTGGCGAGAAGCCATTCC
ATTGTAATGTTTGTGATAAAGCATTCACGGATAAAAGCAATTATTTAAACCACAGAAGGG
TCCATACTGGGGAAAAGCCATACAAATGCGATTTGTGTAGTAAGGCATACTCAGAATCTG
GCCCTTTGCGGATACACCGTCGTGTACATACAGGGGAGAGGCCCTTTCCTTGTGGATTAT
GTGAAAAGGCTTTTGCGAGCCAAGCTAGGCTTCGTGTGCACTGCCGAGTCCACACAGGCG
AGAAACCTTATAAGTGCGAGTTCTGTGAAAAATGTTTCGCTCAGAATGGTACGCTAAGAG
CGCACAGAAGAATTCATCTTGGAGAGAAACCTTACAAATGCGAGTTCTGTGACAGAGCTT
TTACTGAGGATCTTAAAAGGCATGAAAGAGTGCACACTGGAGAGAGACCATTTAAATGTG
ATACATGTGACAAGGCCTTTAAGCAGAAAATTGACTTAATCAGGCATACAAATGTCCACT
TAAAAGAGAAACCTTTTATTTGTAACATTTGTGATAAAGGATTCTCAGTTAAGAGTGTTT
TATCAGTACATTTACGTATACATTCCGAAAAACGGCCTTACGTATGCGACTTCTGCCCAA
AAGCTTTTAGACAGATTGGTAATTTAAAGCGACATCATCTGACGCACACAAAAGAGAAAC
CGCACAAGTGTTTTGCATGTGATGCCGCGTTCGCTGATCTGAGAAGCATGAAAATTCACA
GAATGATCCACACCGGTGAAAAACCTCACAAATGTAACACCTGCGAAGCTGCATTCATGA
ACGTAAGAAGCCTGAAAAAACACCAGAAGATTCACGTTGAAAAAAAGCGTTACATATGTG
AAGTTTGTGAAAAATCGTTTTCTCTTCTTAATACTCTGAAAAATCACAGAAGAATCCACA
CTGGTGAAAAACCATTCAAATGTAAGACTTGTAACAGAGCTTTTGCAGGTCAAAGTAATA
TGCAAAGGCATAGTAAGATTCATTTAAATGAAACTACTTAACA
| PIRSF |
YY-1-like (IPR017114) - T[3-126] 3.2E-12 - T[95-154] 3.0E-13 - T[123-197] 9.6E-17 - T[152-217] 7.4E-14 - T[183-247] 4.3E-11 - T[233-317] 3.7E-17 - T[315-426] 6.4E-18 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[38-88] 1.09E-12 - T[74-131] 3.9E-22 - T[121-153] 2.51E-9 - T[158-215] 2.17E-20 - T[217-269] 5.8E-20 - T[269-325] 4.39E-18 - T[325-381] 1.64E-17 - T[366-418] 5.49E-17 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[38-65] 12.362 - T[66-93] 14.711 - T[94-121] 16.394 - T[122-149] 15.958 - T[150-177] 15.583 - T[178-205] 15.895 - T[206-231] 12.133 - T[232-259] 14.44 - T[260-287] 14.087 - T[288-315] 14.544 - T[316-343] 12.861 - T[344-371] 11.593 - T[372-399] 16.228 - T[400-427] 12.882 |
| SMART |
Znf_C2H2_type (IPR013087) - T[38-60] 9.0E-4 - T[66-88] 0.0033 - T[94-116] 8.0E-4 - T[122-144] 0.038 - T[150-172] 0.0096 - T[178-200] 0.0028 - T[206-226] 7.1 - T[232-254] 0.0021 - T[260-282] 0.0066 - T[288-310] 0.0021 - T[316-338] 0.27 - T[344-366] 0.016 - T[372-394] 0.0033 - T[400-422] 0.0026 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[40-60] . - T[68-88] . - T[96-116] . - T[124-144] . - T[152-172] . - T[180-200] . - T[234-254] . - T[262-282] . - T[290-310] . - T[318-338] . - T[346-366] . - T[374-394] . - T[402-422] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN665_HUMAN | 46.41 % | 362 | 3.03E-120 |
| ZN235_HUMAN | 44.615 % | 366 | 3.92E-120 |
| ZN888_HUMAN | 47.436 % | 367 | 1.14E-120 |
