- Transcript 'KH2012:KH.L147.29.v2...'
Transcript Model
Transcript Id
KH2012:KH.L147.29.v2.A.ND1-1
Possible name(s)
GJA8; GJC1; GJD2
Gene model
Location
KhL147 [75,756 / 79,773]
Amino acid sequence
Length: 276
>KH.L147.29.v2.A.ND1-1
KKRQVRKREFQTMRTMIKVKSTYLAFAQHFRWYLANVFVRLCIEVGFLVLQVLLFGFYVP
EMYKCERRPCPNTVDCFISRPMEKTIFLWFMFLYSCICVALNLVEFVYLVYAYIKKRAQK
RLSSRPKKDVPFYPTKGNKFGRNGLRGEWKQDIDPLELDLAEYQFRQMHDETSSMGSRPA
NGGWGGWYTGRQVPQRKVFVSGSNAFTGSARDASRGDISTRDMMAFELDSDDERDMIEME
IERIEQDELDFQQDIDTGADVGMEVNDQGDVGVNCI
Nucleotide sequence
Length: 1,336
>KH2012:KH.L147.29.v2.A.ND1-1
ATGTCTTGGCATTTCTTGGAACGGTGGGTCGAGAAGGCCAACCAACATTCTACATTAGTG
GGCAAGTTCTGGATTACATTTCTTATCGTTTGTCGGATGGTGATCGTTGCTTCTGTCGGT
GATCGGGTGTACAACGATGAACAAAGTGAATTTAAATGCAATACTCAACAACCTGGGTGT
ACGAACGTATGTTTCAACAGTTTTTCACCGATATCCCATTTACGATTTTGGAGTTTTCAA
ATATTGTTCGTGGCAACTCCTTCCGTAATGTTCGTTGTTTATTCTGCTCATAAAACGAAG
CTGAAAAAAACGTCAAGTAAGAAAGCGAGAATTTCAAACGATGAGGACGATGATAAAAGT
GAAAAGCACGTATCTGGCATTTGCGCAACACTTTCGTTGGTATTTAGCCAATGTGTTTGT
TCGTCTTTGCATCGAGGTTGGTTTTCTCGTTTTGCAAGTTCTTCTCTTTGGATTTTACGT
TCCTGAAATGTACAAATGTGAACGCCGGCCGTGTCCCAACACCGTCGATTGCTTTATATC
TCGACCAATGGAGAAGACGATCTTCTTATGGTTTATGTTTCTATACAGCTGCATATGTGT
AGCACTCAATCTAGTAGAGTTCGTTTATCTGGTATACGCCTATATAAAGAAGCGAGCACA
GAAGCGACTGTCGTCTAGACCCAAGAAGGACGTTCCGTTCTATCCTACCAAGGGCAACAA
GTTTGGTCGAAACGGATTAAGAGGGGAATGGAAACAAGACATTGACCCTTTAGAACTTGA
TCTTGCTGAATATCAATTTAGACAAATGCACGACGAAACTTCTTCAATGGGAAGTAGGCC
AGCTAATGGTGGTTGGGGCGGATGGTACACTGGACGCCAAGTCCCACAACGCAAAGTTTT
TGTCAGCGGTTCGAATGCTTTCACTGGTTCTGCACGGGATGCAAGCAGGGGTGATATTTC
TACAAGAGATATGATGGCGTTTGAGCTCGACTCTGATGACGAACGCGACATGATTGAAAT
GGAAATAGAAAGAATAGAACAAGACGAGCTAGATTTCCAACAAGATATCGATACTGGAGC
TGATGTTGGCATGGAAGTGAATGACCAAGGTGATGTCGGGGTTAATTGCATTTGATGCAA
CTCTTGTAAGATGAAGTGTAGATAAGTTCCAGTCTAGACATTTTTGTAAATTTGATTCGT
TTGATACTTTTCGAAAGAGCAAAACAAATAAGTGTTATTGTCTTTTATGTTCGTCCTATC
TTTGTCCATAAACAATTTATTTTATATTTTTAGTTTTTTGATATTGTGTAATCTAAAGAA
TGTAAACTGAGTGTCG
| Gene3D |
Connexin_N_sf (IPR038359) - T[1-122] 7.7E-35 |
| PANTHER |
Connexin (IPR000500) - T[18-123] 3.7E-46 |
| Pfam |
Connexin_N (IPR013092) - T[22-110] 7.1E-34 |
| PRINTS |
Connexin (IPR000500) - T[29-55] 7.4E-24 - T[65-85] 7.4E-24 - T[86-109] 7.4E-24 |
| SMART |
Connexin_CCC (IPR019570) - T[43-109] 1.9E-39 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[65-81] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXA10_HUMAN | 33.75 % | 95.1 | 4.04E-22 |
| CXA3_HUMAN | 45.161 % | 97.4 | 4.1E-23 |
| CXB7_HUMAN | 51.087 % | 93.2 | 8.85E-23 |
