- Transcript 'KH2012:KH.L147.13.v1...'
Transcript Model
Transcript Id
KH2012:KH.L147.13.v1.A.ND1-1
Possible name(s)
GJC1; GJC2; GJD2
Gene model
Location
KhL147 [69,509 / 73,454]
Amino acid sequence
Length: 563
>KH.L147.13.v1.A.ND1-1
GKMSWHFLERWVEKANQHSTLVGKFWITFLIVCRMVIVASVGDRVYNDEQSEFKCNTLQP
GCTNVCFNRFSPISHLRFWSFQILFVATPSVMFVVYSAHKSKLKKTSSKKARISNDEDDD
KSEKHVSGQKNENIDASISQLQSGSKKMKQFEVDFPVKRPSIEKKGKARGSSRNKNRNSS
RSYPRDGDKDPQAFPRSTMIRLGKQLSDSERTKSWEEETTHRHQKRYSRNSRRGISSSNT
SGVGTFDYRSKRIAFDSNSKPWISASRVSLAMDTIPLKNEKSKKVSDFRDEKFKPTNPLA
MKAHIPAFAQHFRWYLANVFVRLCIEVGFLVLQVLLFGFHVPELYKCERRPCPNTVDCFI
SRPMEKTIFLWFMFLYSCICVALNLVEFVYLVYAYIKKQAQKRVSSSKSKKEVSLHPNKD
SGLSRNGYNGLRGGWMKHDIDPVELDLAEYQFRQMNDDTSSIGSRPPNIGWGGRYTGRQV
PQRKVIVSGSNAFTGSARDASRGDTSTRDMMAFELDSDDERDMIEMEIERIEQDEMDFQQ
DNDANPEDGLDGNDQVDAGDNCI
Nucleotide sequence
Length: 1,716
>KH2012:KH.L147.13.v1.A.ND1-1
AAAGTTGGAGTGTAAGAAAAGTAGGGTAAAATGTCTTGGCATTTCTTGGAACGGTGGGTC
GAGAAGGCCAACCAACATTCTACATTAGTAGGCAAGTTCTGGATTACATTTCTTATCGTT
TGTCGGATGGTGATCGTTGCTTCTGTTGGTGATCGGGTGTACAACGATGAACAAAGTGAA
TTTAAATGCAACACACTTCAACCTGGGTGTACGAATGTATGTTTCAACAGATTCTCACCG
ATATCCCATTTACGATTTTGGAGTTTTCAAATATTGTTCGTGGCAACTCCTTCCGTAATG
TTCGTTGTTTATTCTGCTCATAAATCCAAGCTGAAAAAAACGTCAAGTAAGAAAGCGAGA
ATTTCAAACGATGAGGACGATGATAAAAGTGAAAAGCACGTATCTGGTCAAAAGAACGAA
AATATTGACGCCTCAATAAGCCAGCTCCAATCTGGAAGCAAAAAGATGAAACAATTCGAG
GTCGATTTTCCTGTTAAACGACCTAGCATTGAAAAGAAAGGGAAAGCACGAGGCAGCTCA
CGCAATAAAAACAGAAACAGCAGCAGATCTTATCCGCGAGATGGAGACAAAGATCCTCAG
GCATTTCCTAGAAGTACAATGATTCGTCTTGGTAAACAATTGAGCGATAGTGAGAGAACA
AAGAGCTGGGAGGAGGAAACAACGCATCGTCACCAGAAGAGATATTCACGAAACTCTCGA
CGTGGTATAAGCAGCAGCAATACAAGTGGTGTTGGTACATTTGATTATCGTTCAAAACGT
ATCGCTTTTGATTCAAACTCGAAACCATGGATCAGTGCATCGCGTGTTTCATTGGCAATG
GACACGATTCCACTTAAGAATGAAAAGTCAAAGAAAGTAAGCGATTTTCGTGACGAAAAG
TTTAAGCCAACCAATCCTTTGGCAATGAAGGCTCATATACCAGCATTTGCGCAACACTTT
CGTTGGTATTTAGCCAATGTGTTTGTTCGTCTTTGCATCGAAGTTGGTTTCCTCGTTTTG
CAAGTTCTTCTCTTCGGATTTCACGTTCCTGAATTGTACAAATGTGAACGCCGGCCGTGT
CCCAACACCGTCGATTGCTTTATATCTCGACCAATGGAGAAGACGATCTTCTTATGGTTC
ATGTTTCTATACAGCTGCATATGTGTAGCACTCAATCTAGTAGAGTTTGTTTATCTGGTA
TACGCCTATATAAAGAAGCAAGCACAGAAACGGGTGTCGTCTTCTAAGAGTAAAAAAGAG
GTTTCACTTCATCCTAATAAAGATAGTGGACTCAGTCGGAATGGATACAACGGTTTACGA
GGAGGGTGGATGAAACACGACATCGATCCTGTTGAACTTGATCTTGCTGAATATCAATTT
AGGCAAATGAATGACGACACTTCTTCTATCGGAAGTAGGCCTCCAAATATCGGGTGGGGT
GGGAGGTACACTGGACGCCAAGTTCCTCAACGTAAAGTTATTGTCAGCGGTTCGAATGCT
TTCACTGGTTCTGCACGGGATGCAAGCAGAGGTGACACTTCTACAAGAGATATGATGGCG
TTTGAGCTCGATTCCGATGACGAACGAGACATGATTGAAATGGAGATAGAAAGAATAGAA
CAAGACGAAATGGATTTCCAACAAGATAATGATGCAAATCCTGAAGATGGTTTGGATGGG
AACGACCAAGTAGATGCAGGGGATAATTGCATTTAA
| Gene3D |
Connexin_N_sf (IPR038359) - T[3-148] 2.0E-46 - T[263-404] 9.0E-37 |
| PANTHER |
Connexin (IPR000500) - T[3-405] 2.6E-108 |
| Pfam |
Connexin_N (IPR013092) - T[4-392] 9.1E-88 |
| PRINTS |
Connexin (IPR000500) - T[22-46] 2.2E-20 - T[53-75] 2.2E-20 - T[78-98] 2.2E-20 |
| SMART |
Connexin_N (IPR013092) - T[44-77] 7.5E-15 |
| SMART |
Connexin_CCC (IPR019570) - T[325-391] 1.4E-40 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[347-363] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 50.82 % | 139 | 1.93E-36 |
| CXG2_HUMAN | 54.082 % | 136 | 7.97E-35 |
| CXD2_HUMAN | 53.061 % | 125 | 4.45E-32 |
