Aniseed - Transcript Card

Transcript 'KH2012:KH.C8.96.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C8.96.v1.A.SL1-1

Possible name(s)

TIMM44

Gene model

KH2012:KH.C8.96

Location

KhC8 [6,098,716 / 6,103,236]

Sequences

Amino acid sequence

Length: 432

>KH.C8.96.v1.A.SL1-1
IMYSLCRMVTSSTLRRGALVAGKEARSDNAILDARVVQHVFKNPEVKRDYSNRKGFLENF
IETIKQEYNKDPELKESIKKFRQEAKELEDSDALKQARKKFQEIEKETTQSTEVLQETFG
KIKSKVSETAEELGSSEVGKAASRISGGISDAAKRASESEALKKVQSRLSDIAQGSGVAP
DSLYRPPTVLRMRKQELSVDPDREYQPNTEATNIVMHKDTIWNQQWESFKTSKVGESISE
MKMRFDESDNVLIRGSRFITDKISGVAGSLFGGTDISKVMTEIARIDPEFSAQGFLDFCR
FEIIPNLLEAISQGNENIVKDWCSEAPYNQLMFPVKQAQQIGCRYELTTVDLDHVDIAGA
TKVDQGPVLVISFQTQQIMVVRNKKGDIVEGDSDQIMKVFHVWALCRDVEEMDRRAAWKI
IDQSMSASPMLL

Nucleotide sequence

Length: 1,468

>KH2012:KH.C8.96.v1.A.SL1-1
CATTTTAGCGAGCAATGAGGTGTATAACGTAGCCATACCTTTAAAAAATAGTTGTAAGTG
TAATATAAACTGAATTATGTATTCACTTTGCCGTATGGTTACAAGTTCAACGCTACGAAG
GGGTGCGCTGGTCGCTGGCAAAGAAGCAAGAAGTGACAACGCTATTTTGGACGCCAGAGT
CGTTCAACATGTTTTTAAGAATCCCGAAGTCAAACGTGATTATTCAAACAGGAAAGGCTT
TCTTGAAAACTTTATAGAAACAATTAAACAGGAATATAATAAAGACCCTGAGTTAAAAGA
AAGCATCAAGAAGTTTCGACAAGAAGCAAAGGAATTGGAAGATTCTGACGCTTTAAAACA
AGCGAGGAAAAAGTTTCAAGAAATTGAAAAAGAGACGACACAAAGCACCGAGGTTCTTCA
AGAAACGTTCGGGAAAATTAAATCTAAAGTTTCCGAGACGGCTGAGGAGCTTGGATCATC
AGAAGTTGGCAAAGCAGCGAGTCGGATTTCTGGAGGGATTTCTGACGCTGCAAAACGCGC
CTCGGAAAGTGAGGCGTTGAAAAAAGTCCAATCAAGACTGAGCGACATTGCTCAAGGCAG
TGGTGTTGCTCCTGATAGCTTATATCGACCACCAACTGTATTACGGATGCGGAAACAAGA
ATTATCGGTTGACCCTGATAGAGAATACCAGCCCAACACAGAAGCTACGAATATTGTGAT
GCATAAAGATACAATATGGAACCAACAGTGGGAGTCGTTTAAGACCAGCAAAGTTGGAGA
AAGTATTTCTGAAATGAAAATGCGTTTTGATGAAAGCGATAATGTTTTAATACGAGGTTC
GCGTTTTATCACAGACAAAATATCGGGAGTGGCAGGAAGTTTATTTGGAGGAACAGACAT
CTCAAAAGTGATGACAGAAATAGCTCGAATTGACCCTGAATTTTCGGCACAAGGATTTCT
AGATTTTTGTCGATTTGAAATCATTCCAAACTTACTGGAAGCCATTTCACAAGGGAATGA
AAACATTGTGAAAGACTGGTGCAGTGAAGCGCCATACAACCAGCTAATGTTTCCTGTGAA
GCAAGCCCAGCAAATAGGTTGTCGTTACGAGCTCACCACGGTGGATCTTGACCATGTAGA
TATTGCTGGGGCTACAAAAGTAGACCAGGGGCCTGTGCTTGTAATAAGTTTTCAAACTCA
ACAGATTATGGTAGTTAGGAATAAGAAGGGAGATATTGTAGAAGGAGATTCAGATCAAAT
AATGAAAGTCTTCCATGTTTGGGCTTTGTGTCGAGATGTTGAAGAGATGGACAGAAGAGC
CGCGTGGAAAATAATCGATCAGTCAATGTCTGCCTCGCCAATGTTGTTATGATATGCATT
AATAAATACCATGCACGAAAAGCGATGCGCTGCCATTTAATTGTGGTCGATTTAAAGCAA
ATAAAAATGAGGGCTAACGTTTTCAGTG

InterProScan

PIRSF	Tim44 (IPR017303) - T[14-432] 2.4E-118
SUPERFAMILY	NTF2-like_dom_sf (IPR032710) - T[239-423] 2.76E-53
SMART	Tim44-like_dom (IPR007379) - T[276-425] 2.3E-32
Pfam	Tim44-like_dom (IPR007379) - T[277-421] 2.3E-36

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TIM44_HUMAN	43.171 %	341	4.7E-114