- Transcript 'KH2012:KH.C2.437.v1....' >
- Clone 'cien53695' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'KH2012:KH.C2.503.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.503.v2.A.ND1-1
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
KhC2 [5,263,817 / 5,270,837]
Amino acid sequence
Length: 566
>KH.C2.503.v2.A.ND1-1
AVVMATSMRRFVSYSFVLVCLGTFSLVHSQSIVDVRLFPLTNSYPVLPLSSGALDVQINE
LSSYSWLYVCYDDWSDANSFVACGNLGYPGYTSHSPIAPLSPTALLISCTGTESSLDECQ
HVTTSTCRSGHTYVSCSLRDNQVQRYIRLRAIGLTGVGRVQIAVNSVWGSICGHNWDRAS
ANVACRQLGYGTAREHYSGVQFGQGHGTITVSSINCHGNETNLEQCQYELIPLMSDYTNY
SMDGCSQRNLAGVSCNTPNYGHQESIALVDSPAGQPSVGRVVVRVGSVWGSICSNRWTIR
EAAVVCRQLGLGYAHSSLQDVWQMTASGQGLRTVATNVVCTGNEDALSECEYFINYDPFG
ADCGSGWTTTAAYVGVVCSNELPDLQLDMADLTNSMWVDVLHMNYLRCAAEERCLSTSGY
YPSNSNSTRKLLRFTTSVWNRGTAAFRPWLQSNAWEWHACHGHFHSMAEFAHFDILSIDT
FERAAEGHKASFCLEDSVCQEGVSKRYRCTTETTPTPQGISAGCADTYFAQYDCQWIDVT
DVSNGEYYLRVSYQVNLRLYRMHVDF
Nucleotide sequence
Length: 2,115
>KH2012:KH.C2.503.v2.A.ND1-1
CAGCAGTTGTAATGGCTACAAGTATGCGCAGATTTGTCTCTTATTCTTTTGTTTTAGTTT
GCTTAGGCACTTTTAGCCTTGTGCATTCCCAAAGTATCGTCGACGTCCGACTATTCCCAT
TAACCAACAGCTATCCAGTTCTACCTTTGAGCAGCGGCGCATTGGATGTTCAAATAAACG
AATTGTCGAGTTACTCGTGGCTTTATGTATGTTATGATGACTGGAGTGATGCGAACTCGT
TTGTGGCTTGTGGAAATCTTGGCTACCCGGGATATACATCTCATTCACCTATTGCACCAC
TCAGTCCAACCGCACTTCTCATAAGCTGCACCGGGACCGAAAGCTCATTGGATGAATGCC
AACACGTGACAACCAGCACATGCCGATCAGGTCACACGTATGTGAGTTGCAGCCTTAGGG
ACAACCAGGTTCAAAGATACATTCGGCTGCGAGCAATAGGCCTAACTGGTGTAGGTCGCG
TCCAGATTGCCGTTAATTCAGTATGGGGATCAATTTGTGGCCACAACTGGGACCGTGCAA
GCGCAAATGTTGCATGTAGACAACTGGGCTATGGAACTGCTCGAGAACATTATTCCGGCG
TTCAATTTGGTCAAGGACATGGGACCATCACAGTCTCCAGTATTAATTGTCATGGCAACG
AAACCAATCTAGAACAATGCCAGTACGAGCTCATTCCACTCATGAGTGATTACACTAATT
ACAGCATGGATGGTTGTTCGCAACGTAACCTTGCAGGGGTGTCGTGTAATACACCAAATT
ACGGTCATCAAGAATCGATCGCGTTGGTGGACAGTCCTGCAGGTCAACCCTCCGTTGGCC
GAGTTGTGGTTCGTGTTGGTAGTGTTTGGGGAAGTATATGTAGTAATCGTTGGACAATAA
GAGAAGCTGCAGTGGTGTGTCGTCAGTTGGGTCTCGGGTATGCACACAGCAGTTTGCAGG
ACGTATGGCAAATGACAGCTAGTGGTCAAGGTTTGCGAACTGTTGCTACAAACGTGGTTT
GCACGGGAAACGAGGATGCCTTGAGTGAATGCGAGTATTTCATTAACTACGATCCGTTTG
GTGCTGACTGTGGAAGTGGTTGGACAACTACTGCAGCTTACGTTGGCGTGGTTTGCTCCA
ACGAGTTGCCAGACCTACAGCTTGATATGGCGGATTTGACAAACTCTATGTGGGTTGACG
TGTTACACATGAACTACTTGAGATGCGCAGCGGAAGAGCGTTGCTTGTCGACGTCCGGTT
ATTATCCTTCCAACTCGAACTCAACAAGAAAATTACTCAGATTTACAACCAGTGTATGGA
ATAGAGGAACTGCTGCCTTCAGACCTTGGCTCCAAAGCAATGCTTGGGAGTGGCACGCGT
GTCATGGTCATTTCCACAGCATGGCTGAATTTGCTCATTTCGATATTTTATCTATTGACA
CATTTGAGCGTGCTGCTGAGGGGCACAAAGCGAGTTTCTGCTTAGAAGACAGCGTTTGTC
AAGAGGGCGTTTCAAAACGTTATAGATGCACGACCGAAACAACGCCGACACCACAAGGAA
TATCGGCTGGGTGCGCTGATACGTACTTTGCTCAGTACGACTGCCAGTGGATTGACGTCA
CAGATGTAAGCAACGGAGAGTATTATCTTCGGGTAAGTTACCAAGTAAATTTACGTTTGT
ACAGAATGCATGTAGATTTTTAGTCATCATATATATATAGTACTGTGGGGTGAGACGGGA
CACCTTAACACATAATATCCAAATATTCTAGTCGAAAAATTAACAGCGACTTAAGTGAGT
CGTGAGGATACAGTTTTTATAATTATTTGAATGTTTTTTGAATAGGACCAGAATATAGAA
TGTAAAGGTTTCCCATCTCTCCCACCCTGCTATAACATAAACCGTTTAGGTGAATCTAAA
TCCATTGGAAAGTGTTGGAGAATTAGATTTTGACAACAACCACAACGTTTGCACGATTAC
ACTCAATGACAGATCAGTTGTTGTGAACCGTTGTTTTATACCAAGTGACCAGCGAGAAAC
TTCATAAGGAAATATTTTTCTACATTCCTTGCAGTTTATGTGCTGCAGATTTACATTTGA
CGAAACGAAATGTTT
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[32-141] 1.4E-11 - T[142-260] 6.4E-27 - T[261-383] 3.9E-20 |
| ProSiteProfiles |
SRCR (IPR001190) - T[35-137] 15.081 - T[147-256] 24.243 - T[266-379] 21.682 |
| SMART |
SRCR-like_dom (IPR017448) - T[35-137] 1.6E-5 - T[147-256] 3.1E-25 - T[266-379] 2.2E-15 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[50-137] 5.75E-13 - T[148-256] 3.66E-25 - T[274-380] 1.28E-20 |
| Pfam |
SRCR (IPR001190) - T[51-137] 1.8E-10 - T[156-255] 1.8E-21 - T[276-378] 8.3E-16 |
| PRINTS |
SRCR (IPR001190) - T[147-163] 2.7E-8 - T[166-177] 2.7E-8 - T[181-191] 2.7E-8 - T[212-226] 2.7E-8 |
| Pfam |
Lysyl_oxidase (IPR001695) - T[383-554] 9.7E-70 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[392-416] 1.6E-21 - T[437-458] 1.6E-21 - T[459-479] 1.6E-21 - T[484-505] 1.6E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 33.838 % | 322 | 7.34E-101 |
| LOXL3_HUMAN | 36.316 % | 318 | 1.37E-99 |
| LOXL4_HUMAN | 34.331 % | 313 | 1.03E-97 |