- Transcript 'KH2012:KH.C14.120.v2...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C4.424.v1....' >
- Transcript 'Boleac.CG.SB_v3.S49....' >
- Transcript 'KH2012:KH.C1.416.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.416.v2.A.SL1-1
Possible name(s)
G3BP1; G3BP2; RBM34
Gene model
Location
KhC1 [7,266,997 / 7,272,736]
Amino acid sequence
Length: 471
>KH.C1.416.v2.A.SL1-1
YFYFLPPITQEMVMMAKPSPIQVGREFVRQYYTLLNKAPELLYRFYSMHSSYVHGGRYCN
GEPEKPVIGQNEIHTKIDSLEFRDCHTKIRQVDAHSTIGSGIVVQVTGELSNSGMPLRRF
MQTFVLAPQGDNPYKFYVHNDIFRYQDEVFHDDQQTDRTDDETVPGPDSEEESEAIASVT
AFQDTYYNQTNNEENVNGLEQQVKNMKVESPEIEQPVIEPSPTPSPVPDEREPTPPPTTN
TLDPSPEPPQEEISEPPPPSKPFSWADLASKNTPARSNTQQGTVVKAPPKPEPVEPAESA
PKPPRQPRQNQRFTAPKEEERAYGDRNDARRPRDAPSGVVRYPDNQQIFVGNLPIDIKEA
DLKNHFAEFGNVLEVRINHSHSNNPSFGFVIFESPSAVEKVLEIMPTQYKNNQRINIEEK
KQRNARDARRGGDPRRGAGDNRARRGGGAPQMRRDRQGSRDDGRNYNANRR
Nucleotide sequence
Length: 1,816
>KH2012:KH.C1.416.v2.A.SL1-1
TCTATGTTTATTAACTTTTAAATTTCTGACTTGTGCGTAATATTTCTATTTCCTTCCACC
TATTACTCAAGAAATGGTTATGATGGCAAAACCAAGTCCAATTCAAGTCGGACGTGAATT
TGTACGACAATATTACACCCTGTTAAACAAAGCACCAGAATTATTATACAGATTCTACAG
TATGCACTCATCCTATGTCCATGGAGGCAGATACTGTAATGGGGAACCAGAAAAGCCAGT
CATTGGTCAAAATGAAATCCACACCAAAATTGACTCGCTTGAGTTCCGAGATTGCCACAC
CAAGATTCGACAAGTCGATGCCCATTCTACCATCGGAAGCGGGATTGTTGTCCAGGTTAC
TGGAGAACTTTCCAACAGTGGAATGCCTCTGCGTCGATTCATGCAAACGTTCGTGCTTGC
TCCTCAGGGGGACAATCCTTACAAGTTTTATGTCCACAATGATATTTTCCGTTACCAAGA
TGAAGTGTTTCATGATGATCAACAAACTGATCGAACAGATGACGAAACAGTTCCTGGTCC
TGATTCAGAAGAAGAGAGTGAGGCCATCGCTTCAGTCACGGCGTTCCAGGACACTTATTA
TAACCAAACCAACAATGAGGAAAATGTCAATGGATTGGAGCAACAGGTGAAGAACATGAA
AGTTGAATCACCCGAGATCGAACAACCAGTTATTGAACCTTCACCAACTCCTTCACCTGT
TCCTGATGAAAGAGAGCCTACCCCACCCCCTACCACCAATACACTTGACCCATCCCCCGA
ACCCCCTCAAGAAGAGATTTCCGAACCCCCACCCCCATCCAAACCCTTCTCTTGGGCAGA
CCTTGCATCAAAGAACACCCCAGCACGAAGCAACACACAGCAAGGAACAGTTGTTAAAGC
CCCACCAAAGCCCGAGCCAGTTGAACCCGCTGAGTCAGCACCAAAACCTCCGCGTCAGCC
TCGGCAGAATCAACGCTTCACTGCACCCAAGGAAGAAGAACGAGCGTATGGTGATCGGAA
CGATGCAAGAAGACCCAGAGACGCACCAAGTGGTGTGGTTCGTTACCCTGACAACCAGCA
GATCTTCGTTGGAAATTTACCAATTGACATCAAGGAGGCAGATTTAAAAAATCATTTTGC
AGAATTTGGAAATGTACTTGAAGTGAGAATCAACCACTCACATTCTAACAACCCAAGCTT
TGGATTTGTCATCTTTGAGAGTCCTAGTGCTGTTGAAAAAGTGCTGGAGATTATGCCGAC
ACAATACAAAAACAACCAGCGCATTAACATTGAGGAAAAAAAGCAACGTAATGCGAGGGA
TGCACGTCGTGGTGGGGATCCACGCAGAGGTGCTGGGGACAACCGTGCTCGTCGTGGTGG
TGGTGCGCCTCAGATGAGGCGGGACAGACAAGGGTCTCGAGACGATGGTCGCAATTACAA
TGCAAATCGACGATAATATTCAGCAATTTTACTATTTTATACAAGCGAGTTCTCGTTGCA
TGGTATAACAGCTGAATAAGAAGTTATCTCTTAAGTTCATTCATTTCAGGCTTGCTCAGT
ACTCCCTTTCACACTGTACCACGCTTTTCCTTCCACAATGGATGTAACTATCGTATTTAT
TCAAGACCCACCTTTTACCAAGCTGTAAATCCGATTCAAGCTTGTAAAATGTCAAAAACA
ACGATAGGAAAATGTTAAAAACGTTAATAAAGTATCGCACTAACATTTATGTAAACAATT
CGATTACTGTTAAAGAAAGATCTCCAATGAGTGTCTGTTGTTCTTTTGAGTCCTAATAAA
GGCAATAATATTAATT
| PANTHER |
G3BP2 (IPR034377) - T[14-459] 2.7E-112 |
| CDD |
Nuclear_transport_factor_2_euk (IPR018222) - T[19-147] 1.20973E-42 |
| SUPERFAMILY |
NTF2-like_dom_sf (IPR032710) - T[19-146] 2.73E-34 |
| ProSiteProfiles |
Nuclear_transport_factor_2_euk (IPR018222) - T[23-145] 28.497 |
| Pfam |
NTF2 (IPR002075) - T[23-145] 1.2E-28 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[340-465] 1.6E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[341-448] 1.3E-21 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[346-422] 14.829 |
| SMART |
RRM_dom (IPR000504) - T[347-418] 5.8E-15 |
| Pfam |
RRM_dom (IPR000504) - T[348-415] 1.0E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| G3BP2_HUMAN | 41.395 % | 291 | 1.35E-93 |
| G3BP1_HUMAN | 41.609 % | 279 | 4.31E-89 |