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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'Mooccu.CG.ELv1_2.S38...'
  3. Transcript 'Phmamm.CG.MTP2014.S7...'
  4. Transcript 'Boleac.CG.SB_v3.S111...'
  5. Transcript 'KH2012:KH.C13.99.v1....'

Transcript Model

Transcript Id

KH2012:KH.C13.99.v1.A.SL1-1

Possible name(s)

NUP62; NUP62CL

Location

KhC13 [1,393,851 / 1,403,135]

Sequences

Amino acid sequence

Length: 599

>KH.C13.99.v1.A.SL1-1
FNPCNTIYGILFCSCCFYCNRWKSSYISGEWFVRKHVRWKSSNYSSNRVRVVWSETIRRL
PWCFLFFPCIQPRIHIRRSFLSSTNRCSYLWINVHGLSSGFGFGASTTKPSSQANPSALL
NFGSTTTTAATKSMFGLATAQPSTPATGFSQPAQATGLASKPVSLGGVATTAQPVQQTAS
TGFSLTQQPAKTDGFQLGGLSSGFKLGGLTSSVATTTPAASGFQLGSTAGTGSGVSAAAP
FLSSALASSTNAQQKPAAATTAAATKSGFMLGGSASSTTPSSGFQLGGGLKLGTTTATKT
TAPPVASASPFSLAATSTAPKTAIAPSAGSFGLTSSAATTTAAPASSSTSSGFKLGGGLS
LGGAAATTSSSLGGGIKLPGATAATTTTTATAAVVAETPSLRYKDLETRINKWTNELEQQ
EQLFLTQATQVNAWDKLLIDNGEKITNLNSEFEKVKCDQDRLDQEIDFIRTQQQELEDLL
LPLEEKTRQQVSSLAGAVHTHHADVERERTYNLAENIDAQLKQMVQDLKEVIEHINATSQ
PADAADPVNQISKILSAHMDSLQWLDSNSGALQQKLNVLVKEVNAHKVEQESRFRLAFD

Nucleotide sequence

Length: 2,609

>KH2012:KH.C13.99.v1.A.SL1-1
AAACTGATTATTTGTAAGTTGTTGACTAGTTTACTATTGTTATCTGCTGAAAAATGAGTT
TCAACTTCGGAAAACCAACAACAACAGCGGCAAGCACGGGCTTCAGTTTTGGAACCCCTT
CAAATGCCTTTAGTTTTGGCCAAACTTCAGCTGCACCAGCAACAACTAGTAACACTGGAT
TCTCCTTTGGAGGTGGTGGGGGAAATAACACAGGGTTTGGAGGGGGTATCGGTACCACTG
GCCAATCGTCATCTTTGTTTGGTAGTTCAACCCCTGCAACACAATCTACGGGATTCTCTT
TTGCTCCTGTTGCTTCTACTGCAACAGGTGGAAGTCAAGTTACATCAGCGGGGAGTGGTT
TGTTCGGAAGCACGTCAGGTGGAAATCAAGCAACTACAGCAGCAACAGGGTCAGGGTTGT
TTGGAGCGAAACCATTCGGAGGCTCCCTTGGTGCTTCCTCTTCTTTCCTTGCATCCAACC
CCGCATCCACATCAGGAGGAGCTTTCTCTCTTCCACAAACCGCTGCTCCTACCTTTGGAT
CAACGTCCACGGCTTATCTTCTGGATTCGGGTTCGGAGCTTCTACAACAAAACCGTCTTC
CCAAGCCAACCCTTCCGCTCTTTTAAATTTTGGTTCAACAACAACGACAGCAGCAACAAA
ATCCATGTTCGGTTTGGCTACAGCTCAGCCAAGCACTCCTGCTACTGGTTTTTCACAGCC
TGCACAGGCTACTGGGTTGGCTTCAAAACCGGTTTCTCTTGGTGGCGTTGCTACTACAGC
ACAACCTGTACAGCAAACTGCATCAACTGGGTTTTCTCTAACTCAACAGCCAGCAAAAAC
AGATGGTTTCCAACTTGGTGGTTTATCATCTGGGTTTAAACTTGGTGGGTTAACATCAAG
TGTTGCTACAACCACACCGGCTGCATCTGGGTTCCAGCTTGGCTCGACAGCGGGCACAGG
GTCGGGTGTCAGTGCTGCTGCCCCATTTTTGAGCTCAGCATTAGCGTCAAGTACTAACGC
TCAACAGAAGCCGGCAGCTGCAACAACAGCAGCAGCCACAAAATCTGGTTTTATGCTTGG
TGGATCTGCAAGCTCCACTACGCCATCTAGCGGTTTCCAACTTGGAGGAGGATTGAAACT
CGGTACAACAACAGCAACAAAAACCACAGCTCCACCAGTGGCCTCTGCTTCTCCATTTAG
TCTGGCTGCAACATCAACTGCACCAAAGACAGCAATAGCTCCCTCCGCTGGCAGTTTCGG
CCTCACTTCTTCAGCTGCCACGACGACAGCAGCACCAGCCTCAAGTTCGACATCTAGTGG
ATTTAAATTAGGTGGTGGCTTGTCACTTGGTGGGGCTGCTGCTACAACAAGTTCATCACT
CGGTGGGGGTATTAAGCTGCCAGGAGCCACTGCTGCCACTACAACCACGACAGCAACAGC
TGCAGTTGTTGCAGAAACCCCATCGTTGAGATATAAAGATTTAGAAACCAGGATCAACAA
ATGGACAAATGAATTGGAGCAACAGGAACAACTGTTCCTCACACAAGCCACACAAGTTAA
TGCGTGGGATAAACTGCTTATTGATAATGGGGAAAAGATCACCAACTTAAATAGTGAGTT
TGAAAAAGTGAAATGCGATCAGGACAGACTTGACCAGGAGATTGATTTCATCAGGACTCA
ACAACAAGAACTGGAAGATCTCTTGCTCCCTCTTGAGGAGAAGACAAGGCAGCAAGTATC
GTCACTAGCTGGAGCTGTGCACACACATCATGCAGATGTAGAAAGGGAAAGAACTTATAA
CCTTGCTGAAAACATTGACGCCCAACTTAAACAAATGGTTCAGGATTTGAAGGAGGTAAT
TGAGCATATCAACGCTACAAGTCAACCTGCTGATGCTGCTGACCCAGTCAACCAGATATC
CAAGATATTATCTGCACATATGGATTCCTTGCAATGGTTGGACAGTAACTCTGGTGCCCT
CCAGCAGAAGTTGAATGTTTTAGTAAAAGAAGTAAACGCTCACAAAGTGGAGCAAGAGAG
CCGATTCAGACTCGCATTTGATTGATGGAGATTTTTGCGGAAACCGGAACTACAAAGATG
GTTTATCTCATAGAGATAAAAAACTGTGGGTATAGAGATCATAAACGAACAATTTTCACT
GCCGAAAATATAAATATTTATGAATTTCAAATCATGAGTAAATTTAAACAAAAAGTTTTT
ACCTATTTTTTGGGGGAAAAAACTGTTTTGATAAACATCATTTATTGAAGCAGTTATAAA
AACATTTATATTAATTAGAATTTAGAGCACAACCTGAAAATAACCTTTTAGGTTATGAGA
ATTGTAATTTTTATGCAACAAATATTTGCAACATGGCCAAAGGCCAGTGACTTGCATTTA
ATATGAAAATTGTTTCATTTTTGAAAGTAAACAACAAACAATGCGTGATTTATGACGTAA
CAATGCTGGTTGAAGGGTCAAAGTACGTCATAATGCTGTTTAACTTATCATAACATTAAC
TATGATCAAACAATGAGTATTAATCAGTTTACTGGAAGTCAGGTGGTGTTTGGTTAGGCA
CCTTACGCATACAAATTATAATTAGCAAC

InterProScan

PANTHER
NSP1/NUP62 (IPR026010) - T[98-597] 2.1E-116
Pfam
Nucleoporin_NSP1_C (IPR007758) - T[388-495] 1.7E-32

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NUP62_HUMAN 60.302 % 269 6.2E-83
N62CL_HUMAN 61.765 % 116 5.19E-30