Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C12.175.v1.B.ND1-1

Possible name(s)

KLHL1; KLHL12; KLHL20

Gene model

KH2012:KH.C12.175

Location

KhC12 [181,469 / 184,974]

Sequences

Amino acid sequence

Length: 186

>KH.C12.175.v1.B.ND1-1
QYIDQMCVAGGWGDGFDIFSSVELYDPVVNTWTNIAPMKTKRQDHAFVSYNGRLYSFGGY
IGSNRLNSMESYDPREGEWELLKPMNEKKSGLCGVVYNDEIYAIGGRGLKSVERYNIRTN
TWTKVSSLNHERDGSCACVVNGKIYVIGGLSDDVSKSIEAYDATINEWKIETNMETPRSH
ASVVAL

Nucleotide sequence

Length: 876

>KH2012:KH.C12.175.v1.B.ND1-1
TATGAAAGGTGGGGTTCAACCAGTGTGAAGATAAACAACCATGTTTATACGGCTGGTGGT
CGTGGATCCAAGTCTGTCGAATGTTTGAATTTAAACCAAGTTGATGGTGATTGGAATATT
GTGGCATCTATGAAGAAACAACGATGTCTTGCAGCATCTGCTGTGTTAAACGGTTGGTTC
CTTATTGTGTTTAACAATATATTGATCAAATGTGTGTAGCAGGAGGATGGGGTGATGGTT
TTGATATATTCTCATCAGTTGAATTATACGATCCAGTGGTGAATACATGGACAAACATTG
CTCCAATGAAAACTAAACGACAGGACCATGCTTTTGTTTCTTATAATGGTCGCTTGTACT
CGTTTGGTGGATATATTGGTTCAAATCGTTTAAATTCAATGGAAAGTTACGATCCAAGAG
AAGGGGAATGGGAATTACTAAAACCAATGAATGAGAAAAAATCTGGATTGTGTGGTGTTG
TTTACAATGATGAGATTTACGCCATTGGTGGTCGTGGATTGAAAAGTGTCGAGCGGTATA
ACATACGAACCAACACTTGGACCAAAGTTAGCAGCTTGAACCACGAACGAGATGGTTCTT
GTGCTTGTGTTGTGAATGGGAAGATATACGTCATTGGAGGTCTTAGTGATGATGTATCAA
AATCAATTGAGGCTTATGATGCAACAATCAATGAATGGAAGATTGAAACCAACATGGAGA
CACCAAGATCTCATGCATCAGTTGTAGCTTTGTAAACAATGAAAATCCTTAACAAAACTG
TTTGTGTATTTCATGATTTGTTTTGATAAATATTCCATCAATAGTTTTGTAAACAACATG
AGCCACTGAATTAAATAAAATCCTTATTACATAAAA

InterProScan

Gene3D	Kelch-typ_b-propeller (IPR015915) - T[2-186] 1.8E-62
SUPERFAMILY	Kelch-typ_b-propeller (IPR015915) - T[5-185] 3.14E-54
SMART	Kelch_1 (IPR006652) - T[5-52] 1.9E-6 - T[53-99] 4.0E-10 - T[100-142] 9.2E-10 - T[143-186] 1.2E-7
Pfam	Kelch_1 (IPR006652) - T[9-38] 1.8E-5 - T[42-86] 1.5E-13 - T[91-129] 4.2E-10 - T[134-174] 5.4E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
KLH12_HUMAN	40.957 %	137	3.5E-38
KLH20_HUMAN	39.766 %	128	1.06E-34
KLHL1_HUMAN	34.392 %	118	4.37E-31