Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.1275.v1.A.SL2-1

Possible name(s)

RUVBL1; RUVBL2; YME1L1

Gene model

KH2012:KH.C1.1275

Location

KhC1 [1,837,141 / 1,840,609]

Sequences

Amino acid sequence

Length: 460

>KH.C1.1275.v1.A.SL2-1
KLSKMKIEEVKSTTKTQRIAAHSHVKGLGLDDEGKATHSASGMVGQEEAREACGVVVDLI
RSKKMAGRGVLLAGPPGTGKTALALAIAHELGNKVPFCPMVGSEVYSTEIKKTEVLMENF
RRAIGLRIKETKEVYEGEVTEVTPHETENPMGGYGKTVSHVVLGLKTAKGTKQLKLDPSI
YENLQKEKVECGDVIYIEANSGAVKRMGRSDTYATEYDLEAEEYVPIPKGDVHKRREVIQ
DVTLHDLDVANARPQGGQDVVSIMGQLMKPKKTEITDKLRTEINKVVNKYIDQGVAELVP
GVLFVDEIHMLDIECFTYLHRALESAISPIVIFATNRGHCTIKGTEDIVAPHGIPLDLLD
RILIIKTMMYSNEEMIKILNIRAKIEGIQVSDVAMTVFGEIGSRTSLRYVVQLLTPASIL
ARINGREAIAKEDIDEINELFYDAKSSAKILSEQGDKFMK

Nucleotide sequence

Length: 1,490

>KH2012:KH.C1.1275.v1.A.SL2-1
TAAACGGAAAGTTATTTTTTATTTACTGCTTTATTAACGTGGTAAAAACTCTCCAAAATG
AAGATTGAAGAAGTCAAATCTACAACGAAAACGCAGCGAATCGCGGCACACTCTCACGTT
AAAGGGTTAGGTTTAGATGACGAAGGAAAAGCAACACATTCTGCTTCGGGTATGGTGGGG
CAAGAAGAGGCGCGCGAGGCATGTGGGGTTGTGGTTGATTTGATCCGAAGCAAGAAGATG
GCAGGACGTGGTGTGTTGTTGGCTGGACCTCCTGGGACGGGAAAAACTGCCCTTGCATTA
GCCATTGCCCATGAGCTTGGTAACAAGGTTCCATTTTGCCCAATGGTTGGCAGCGAAGTC
TATTCAACCGAGATTAAAAAGACCGAGGTCTTGATGGAGAACTTCCGTCGTGCGATTGGA
TTGCGGATAAAGGAAACCAAGGAAGTTTACGAGGGAGAGGTCACAGAGGTCACGCCTCAC
GAGACCGAGAACCCAATGGGAGGTTATGGAAAGACAGTCAGCCATGTTGTGCTGGGATTA
AAAACAGCCAAAGGAACAAAACAACTCAAACTTGATCCTTCAATTTATGAAAATCTACAA
AAGGAGAAAGTCGAATGTGGCGATGTTATTTATATTGAAGCTAACAGTGGAGCTGTGAAG
AGGATGGGACGATCCGATACTTACGCCACTGAGTACGATCTTGAAGCTGAAGAATATGTC
CCCATCCCTAAAGGAGATGTTCATAAACGACGAGAAGTAATTCAAGATGTCACTCTTCAT
GATCTGGATGTTGCGAACGCTCGGCCGCAAGGAGGACAGGATGTTGTGTCTATCATGGGA
CAACTCATGAAACCTAAGAAAACTGAAATTACAGATAAACTGAGGACGGAGATCAACAAA
GTAGTGAACAAATACATTGACCAAGGAGTAGCAGAGCTTGTACCTGGTGTGTTGTTCGTA
GATGAGATTCATATGTTGGATATTGAGTGTTTCACGTACCTTCATAGAGCATTGGAGTCT
GCCATCAGTCCCATTGTAATATTCGCAACAAATAGAGGACACTGTACAATAAAAGGCACG
GAGGACATCGTTGCTCCTCACGGGATTCCTCTTGATCTGTTGGACCGCATCCTTATCATA
AAGACAATGATGTACTCCAATGAAGAAATGATCAAGATCTTGAACATCCGTGCGAAGATC
GAGGGAATCCAGGTATCGGATGTTGCCATGACAGTGTTTGGGGAGATTGGGAGCAGAACG
TCGTTAAGATATGTTGTTCAACTACTGACACCTGCAAGCATCTTGGCCCGTATCAATGGT
CGTGAAGCAATTGCCAAAGAAGACATCGACGAAATAAATGAGTTGTTCTACGATGCAAAA
TCGTCGGCTAAAATATTATCCGAACAAGGAGATAAATTTATGAAGTGATGATAGATATGT
AGTGTGTGTTGAATGCTGTTGATTTTTATAATAAAACTCAATCTTCTGTA

InterProScan

PANTHER	RuvB-like (IPR027238) - T[5-459] 2.8E-248
PANTHER	RUVBL1 (IPR037938) - T[5-459] 2.8E-248
Pfam	TIP49_C (IPR010339) - T[18-419] 4.7E-191
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[40-156] 1.42E-37 - T[202-439] 1.42E-37
SMART	AAA+_ATPase (IPR003593) - T[66-374] 2.0E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RUVB1_HUMAN	81.36 %	791	0
RUVB2_HUMAN	44.298 %	386	3.67E-131