- Transcript 'Boleac.CG.SB_v3.S7.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S7.g13299.01.t
Possible name(s)
SOCS6; SOCS7
Gene model
Location
S7 [457,870 / 463,009]
Amino acid sequence
Length: 467
>Boleac.CG.SB_v3.S7.g13299.01.p
MSMAEFEADKTHEDISEENNSPSTTEGLQESLHDRLSHRNEHTSSEIFNRNGLKRRERRH
VYHDIAPLKTDSTNSGLDYVNGCEEGTQSRLVKPKLPPKPKYILRDKLTRHVYQSIRLPN
TEGTASIPPPLPFKPPHIERLRLSPMETPPPLPPRVLNQQAIQQRQRLDHEYFENLRKSV
DEELLGLVEENDLPVPLNLPITNNMQPSRFQYGAHSPPLDLSNRSDDYPPPVPRRHSLPL
REHGDHEMHHNNQMQSTRSTRSSFNNLDAEERAIPDTSKANLAYNFILLKRCGWYWGNMN
WQEAEELLSKNASNGAFLVRDSQDSRHLLTITVRSTTNTLHHIRVEYCEGKFQLYEAGGS
VSQSTAQCVRHSNIQQFVNLAVKHSISGSFLYFLKPRNMGEPPVQIQLLTPTSRFAKVKS
LKYICRLTIREIVVSDLIAALPVPPSIQQYLKTGPYYDVNEEQDCKR
Nucleotide sequence
Length: 2,577
>Boleac.CG.SB_v3.S7.g13299.01.t
ATCCAAGCTCCGGGGGAGCGACTACTCAGAATTTCAGAATTTTCTCATTTTCTAACCACC
TTAATTTTTATTTTGTTTTTTCTTCTGCTTCTCCTACTGCTGCTGATCTGCTCCAGCACT
GATATATTCGGTAGGCAGCTTAGCGGGCGACTCTCGTGACCATGAATTTGGAAAATGCAT
CAAATGAAGAAAAGTTGAAGATGTGCCAGAAATATTATTATGGTGGATTTGCTTTCCTAC
CCTTCTTGTGGGCTGTAAATGCCATTTGGTTTGCCAAAGAAGCTTTTGTGAAGCCTTCTT
ACCCAGAACAACGCCGGATCCGTCAATATGTTATTAGGTCAGCACTTGGATCGTGTATAT
GGATTGCTGGACTTATAGCCTGGATAGTCCTCTTTCAAGTAAACCGGGCAGAGTGGGGTG
CAACTGCAGATTATATTTCATTTATTATTCCAGCAGGAATACCATGAAACCAACTGATAG
GCCTATCGTCTGTTTCTAAGGTGGACCTTATCCTATCCAGCAATTATTTTTACCAATGTT
CTGTGACCGATTTTGTAATGAATGCTTAGATGCCTGCCTAAGCTCTTGAATATTGATATT
TATGGTGTGATGCTCAAGTTTGTAAATTCTGGCCATCTAAATACTTTGGAAAATTGTGCA
ATTATTCACTCGTGTGTTTACTCAGCTAGTTTCGATAGGCCTGACAAAACACTGCATACG
GTAGCTTAGAGATACTTAATATAATTCGAGTGAATTTGTGTATTTGCTTTTCCCAGGTCA
CCAAATTTGTGATGTCCAAAGTGGGCAGTCATTTTCATGTCTATTGATATTCCTTCTCCT
CAGTTTATTGATTGATTGTATTGTAGGCCTAAAGAAGTATTGGAATTTCCATATTATTTT
TCATTGCGCTACCCACAGCGATAGGTCCAGATGTTGTGATTCTACCTGGGCTATTATACT
ATGATTTTCTATTTATATGTTTTCAGATTTTGTAATGATGTGACCACCGGAGGTGGTCAA
AAAGTAGGCTACATTTATTGGCTTGTTGGAGTGTGAGTAGCCTATTTATGAGCATGGCAG
AATTTGAAGCAGATAAGACACATGAAGATATTTCTGAAGAAAATAATAGCCCTAGCACAA
CCGAAGGATTACAGGAATCATTGCATGATAGGCTTAGTCATCGCAATGAACACACTTCAA
GTGAAATTTTCAACCGAAATGGTTTGAAAAGAAGGGAGAGGAGACATGTCTATCATGACA
TTGCACCTCTGAAGACGGACTCCACAAATTCTGGTCTTGACTATGTGAATGGCTGTGAAG
AAGGAACACAATCAAGATTGGTTAAACCAAAATTACCCCCAAAACCAAAATACATTTTGC
GTGATAAATTGACACGGCATGTATATCAAAGCATTCGTTTACCAAACACAGAGGGAACTG
CTTCTATCCCACCACCGCTACCCTTCAAGCCGCCACATATAGAAAGACTGAGGCTGTCTC
CAATGGAAACTCCACCTCCATTGCCTCCCCGTGTCTTGAATCAGCAAGCCATTCAACAAA
GACAACGACTAGATCATGAATACTTTGAAAACTTGCGGAAGAGTGTCGATGAAGAATTGC
TAGGATTAGTTGAAGAAAATGACCTTCCTGTTCCACTGAATTTGCCTATTACAAATAATA
TGCAGCCATCAAGATTCCAATATGGTGCTCACAGTCCTCCTTTGGATCTGTCTAATAGAA
GTGATGATTACCCACCCCCTGTCCCTAGACGTCACTCACTTCCTCTGAGAGAACATGGTG
ATCATGAAATGCATCACAACAATCAAATGCAATCGACTCGTTCAACAAGATCGAGCTTTA
ACAATTTAGATGCAGAAGAAAGAGCAATTCCTGACACCTCTAAAGCAAATTTGGCATACA
ATTTTATCCTTCTAAAGCGGTGTGGATGGTACTGGGGTAATATGAACTGGCAAGAAGCAG
AAGAGCTACTGTCAAAAAATGCTAGTAATGGTGCTTTCTTGGTCAGAGATAGTCAGGATT
CACGTCACTTACTCACCATCACTGTTCGTTCCACAACAAATACACTGCATCACATTCGTG
TTGAATATTGTGAAGGTAAGTTTCAACTTTACGAAGCTGGAGGGAGTGTCAGTCAAAGCA
CCGCACAGTGTGTGAGACACTCAAACATCCAACAATTTGTAAATCTTGCTGTCAAGCACT
CAATCTCTGGCAGTTTTCTATACTTTTTGAAACCGAGAAATATGGGGGAACCACCTGTAC
AGATACAGCTCTTAACACCTACGTCAAGATTCGCTAAAGTGAAATCACTGAAGTATATTT
GTCGCTTGACGATTCGTGAAATCGTAGTCTCGGATCTCATAGCTGCTTTGCCAGTGCCAC
CAAGCATACAGCAGTATTTGAAAACGGGACCATACTATGATGTGAACGAGGAGCAGGACT
GTAAGCGCTGATATTTTTTTGTCCATTGAACTTACTTGGGATCGGAAGTTTCACTCAAAT
ATTTTAACATATTTATAGAATCCGTTTATATTTGTGCAATAAAGCAACCACTTTTGG
| PANTHER |
SOCS7 (IPR028423) - T[53-138] 2.7E-44 - T[280-462] 2.7E-44 |
| SUPERFAMILY |
SH2_dom_sf (IPR036860) - T[278-386] 2.96E-20 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[278-464] 1.1E-37 |
| SMART |
SH2 (IPR000980) - T[292-387] 7.1E-18 |
| ProSiteProfiles |
SH2 (IPR000980) - T[294-397] 13.949 |
| Pfam |
SH2 (IPR000980) - T[294-366] 1.5E-10 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[407-457] 13.907 |
| SUPERFAMILY |
SOCS_box-like_dom_sf (IPR036036) - T[407-456] 8.24E-8 |
| SMART |
SOCS_box (IPR001496) - T[412-455] 1.4E-8 - T[418-454] 6.5E-7 |
| Pfam |
SOCS_box (IPR001496) - T[418-452] 1.5E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOCS6_HUMAN | 37.5 % | 114 | 2.39E-27 |
| SOCS7_HUMAN | 41.969 % | 150 | 9.33E-40 |
| SOCS2_HUMAN | 34.171 % | 85.1 | 3.85E-19 |
