- Transcript 'Boleac.CG.SB_v3.S51....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S51.g10947.01.t
Possible name(s)
CWC22; NOM1
Gene model
Location
S51 [87,048 / 92,923]
Amino acid sequence
Length: 750
>Boleac.CG.SB_v3.S51.g10947.01.p
MGRKNTFSSTIEQVFNKYGHEHEXSDHKVVKEVGRKQRRREAKLLKKKKLPQKVEIVTQH
VDKKNESTPASKKPKIDNRKRKAESSSDIRNKALRLENAREDKVIGDLEKKLFLNKSKKK
KKLPKSFVDSGLDYILDVVDGDFDHDSDDQDEFFSKAPELDLSKDESADEQFEDDVLSND
ESTEGGDIDDISSDDMEDNVKTTPNDVETNKQSQLEVSKLNRESGKYIPPAKRVQLSDEQ
QRNMEKLGRKLKGLLNRLSESNLKSICDDIETMYLNNSRAILHKVMADALMNQFNTPDPS
TESILVENAMVIATLSMRVGIEVLMHIYEVVALKLETLVKTKDEKDGKASNNLIQLMCFL
YQFKVIDCKVILDIFCLLIDSFTEKDIELILEILNKVGFQMRKEDPESLKNMIQDIGAKC
SDLEVETDDGSRMSYMLSVLTAIKNNNIRKVTSYDPDEVVQRRKRLACLTKSVAINNETM
PPITLQDFLNIAKNGRWWIVGSSFSGRPMLKDGNVKDKNENDILPASDFSVSRKIIEAAK
AQRMNTDVRRKIFYAVMGADDYIDAFEKIMKCCLKGKQLREIANVVVDCCQKGKTYNPYY
MHLLNRFCQYDRQFSISIQCTLWDRFKVLGTMKMSQRRNIATLMSQLIAKGALSLNCLKT
VEFTEIEKDTINFLRLFLCKLAEEVDNENNLSQIFEHLKSSKTKVVRQGLHLFLQYFVVK
DENFMSEHSHLKTAFQIMATSLGKAASTFL
Nucleotide sequence
Length: 3,135
>Boleac.CG.SB_v3.S51.g10947.01.t
ATGGGCAGGAAAAACACATTCAGCTCTACAATCGAGCAAGTGTTCAATAAATATGGTCAC
GAACACGAGGNATCAGATCATAAAGTCGTCAAGGAAGTTGGAAGAAAACAAAGGAGAAGA
GAAGCAAAGCTACTAAAGAAGAAAAAACTTCCACAAAAAGTTGAGATCGTTACTCAACAC
GTAGACAAAAAAAACGAAAGTACACCAGCATCTAAAAAACCAAAAATTGACAACAGAAAA
CGNAAAGCAGAGTCATCATCTGACATAAGGAACAAAGCTCTGCGATTAGAAAATGCTCGT
GAAGATAAAGTCATCGGAGATTTGGAAAAGAAATTGTTTTTAAACAAGTCAAAAAAGAAG
AAAAAGCTACCAAAATCTTTTGTCGATTCGGGGCTAGACTATATTTTAGATGTTGTCGAT
GGTGACTTTGATCATGACAGTGATGACCAGGATGAATTTTTCTCAAAAGCGCCAGAACTG
GACTTATCAAAAGACGAATCCGCAGATGAACAATTTGAAGATGACGTGTTATCTAATGAT
GAGTCCACGGAAGGTGGAGATATTGATGACATTTCCTCTGACGATATGGAAGACAATGTG
AAAACGACACCAAATGATGTTGAAACCAATAAACAATCTCAACTGGAAGTCAGTAAATTG
AATAGAGAGTCTGGGAAATATATACCTCCAGCAAAGCGAGTTCAACTCTCTGATGAGCAA
CAAAGAAATATGGAAAAATTGGGTAGAAAATTGAAAGGTTTACTCAATCGTTTGAGTGAG
TCGAATTTGAAATCGATATGCGATGACATTGAGACAATGTACTTGAACAACAGTCGGGCC
ATTTTACACAAAGTTATGGCTGATGCACTGATGAATCAATTTAATACACCTGACCCATCA
ACTGAAAGTATACTNGTAGAAAATGCGATGGTAATTGCAACCTTGAGCATGAGAGTTGGT
ATTGAAGTTCTGATGCATATATACGAAGTTGTTGCTCTCAAACTGGAAACTCTCGTCAAA
ACAAAAGATGAAAAAGATGGNAAAGCCTCAAACAATCTGATACAGCTCATGTGTTTTCTC
TACCAGTTTAAAGTGATTGACTGCAAAGTTATACTTGATATATTTTGTTTACTGATTGAT
TCATTCACCGAAAAAGACATCGAGTTGATCCTAGAAATACTGAACAAAGTTGGTTTTCAA
ATGAGGAAAGAAGACCCNGAATCTCTCAAGAACATGATTCAAGATATTGGAGCTAAATGC
AGTGATCTGGAAGTTGAAACTGATGATGGGTCAAGAATGTCATACATGTTGAGCGTACTA
ACGGCAATAAAGAATAATAACATCAGGAAAGTTACTAGTTATGATCCGGATGAAGTGGTT
CAGAGGAGAAAACGATTGGCCTGTCTCACCAAAAGTGTGGCTATCAACAATGAAACAATG
CCACCTATTACATTACAGGATTTCTTGAACATTGCAAAGAATGGTCGATGGTGGATTGTG
GGAAGCTCATTCTCTGGGAGGCCAATGCTGAAAGACGGGAACGTGAAGGACAAAAATGAA
AATGATATTTTGCCAGCATCAGATTTTTCTGTTTCACGTAAAATTATTGAAGCTGCTAAA
GCGCAAAGAATGAACACGGACGTCAGGCGGAAAATATTTTATGCCGTGATGGGGGCTGAC
GATTACATAGATGCGTTTGAAAAAATCATGAAGTGCTGCTTGAAAGGAAAACAGCTTCGA
GAAATTGCCAATGTTGTTGTTGATTGTTGTCAAAAGGGGAAAACCTACAATCCATACTAC
ATGCACCTTCTAAACCGATTCTGTCAATATGATAGACAATTTTCAATAAGCATCCAGTGT
ACGCTGTGGGATAGATTTAAAGTGCTTGGGACAATGAAAATGAGCCAACGACGAAATATC
GCTACTCTGATGTCTCAACTTATTGCTAAAGGCGCATTATCTTTGAATTGCTTGAAGACT
GTGGAATTCACTGAAATTGAAAAAGATACGATAAACTTTCTCCGACTGTTTCTCTGTAAA
CTTGCNGAAGAAGTTGACAATGAAAATAACCTGAGTCAAATTTTTGAACATCTGAAATCT
TCAAAGACAAAAGTTGTACGACAAGGACTGCATCTATTCCTACAATATTTTGTCGTAAAA
GACGAAAATTTCATGTCAGAACATTCTCATCTGAAGACTGCATTTCAAATCATGGCTACA
TCGTTAGGAAAAGCTGCTTCAACATTTTTGTAATCATGAACTATTTTGCCTGGTCTCATA
GGATATTCCATCTTTGGTGCCATTGCGGGAATACTGCATGTAATTCCATGGTCATAATCA
TAATTCTATATGATTCAGCATGTTTTCAAATATCTCTTGACCATGCCNGCATTGTTTGCA
TTACAAATATTAATATTGACCAGGAAAAATANGGGTGTCACATGTTATGGACCATAGCGT
GATTTCGAATGGTTTTAGCTGTGAAATTGGGTAGCTACGTCCTCCCATATTTCACAATAG
CATTGGGTCCGAATTTGGGTCAACAGTCCCAATCTAAGTCCTTGAGCAGAGATGCCAAGT
GTCAAGAGCTCTGCCAAACCTTCCAGGCTGGTTGGTGATGTGGACATGTACCCTGCACCA
GTGTTCAAAGTTGATGACTTAATACGACAGGCGTTATAGGCAATCCCNCTATGGGATTTA
ATGACATTTCATCCGTTAATGGATTANAATGTATTATTCATAACAATATATATCCATAAG
TGCTTACTCGAGACACACAGTCGACGTGGTTGTATCTTTTTAGCAGGTAGTTCCTTATAG
CGAAGGTTAAATACTCTTATTGACTTGATTGATGTAATTGTTCGATGGAATTCAAGTTCA
ATTTTGATGTGGGGGACGAATCATCTGAAGTCAAGCCTAGTTCAAAAGACATCCGTTGTT
CTGAAAGTAAAAAAGCAAAATGTAACGAATCAACTGTCAAACACTACGGAGTTGCCGATA
TTATCAAGCGCTGGTCGTTCAAGGATTCGGCTGACATATATGCTATTGANGAAGTGAATG
TNCCCGGAGAAGAGTCATCACTGTATACCATCACGCCGAGTGACCCAGATGATAAAACCA
CACNCNCTGCAAATG
| Gene3D |
MIF4-like_sf (IPR016021) - T[210-489] 8.7E-47 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[239-449] 1.92E-26 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[248-447] 9.7E-10 |
| Pfam |
MIF4G-like_typ-3 (IPR003890) - T[249-447] 6.3E-11 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[547-663] 18.762 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[548-654] 5.6E-14 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[548-653] 7.0E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOM1_HUMAN | 38.845 % | 370 | 5.42E-116 |
