- Transcript 'Boleac.CG.SB_v3.S49....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S49.g10586.01.t
Possible name(s)
FCN2; FIBCD1; TNXB
Gene model
Location
S49 [177,678 / 184,103]
Amino acid sequence
Length: 406
>Boleac.CG.SB_v3.S49.g10586.01.p
MRLIAIFACLLCAFKSAWSTCGAQDFSDLLSQHCQSWCGSAAPQGPSVTPRVGKAGPKGD
AGSRGPIGSPGEPGISGSPGPEGRQGEAGPPGRVNMTEISQIIKSEVESVFASWHPKSCK
KARDLTPTRQSGIFYIDQPILGITEVYCDLETDGGGWTVFQRRVDRSVDFYRGWNSYMEF
EILIVLLHLVTLQTVAVCGDVTAEKTIADRKIASALRLLTPQHCVNIGVELVNIIKQSGN
IEDISRLEDLGLVEVGDVIRGERNWTVFQRRVDGSVNFYRGWDQYYELRVDLVQTNGTVI
YAKYNNFRIGPATDNYRLTISGYSGNATDSLEYHDRMEFTTNDNDNDIHSGINCAVANTG
AWWYKNCYMSSLNGIYGWNGITWRDRNNGNAKRIMSFTEMKFRRKS
Nucleotide sequence
Length: 1,583
>Boleac.CG.SB_v3.S49.g10586.01.t
CTAGATGCGACTCATTGCGATATTTGCCTGTCTTCTGTGTGCCTTCAAATCAGCATGGTC
CACTTGTGGCGCACAGGATTTCAGCGACCTTCTCAGTCAACATTGCCAGTCATGGTGTGG
ATCTGCTGCTCCTCAAGGGCCATCTGTCACTCCTAGAGTAGGCAAGGCGGGCCCAAAAGG
AGACGCTGGATCAAGGGGACCTATTGGTTCTCCGGGAGAACCCGGAATCTCCGGATCACC
AGGCCCAGAAGGACGGCAGGGTGAAGCCGGGCCGCCAGGAAGAGTAAACATGACAGAAAT
CAGTCAAATAATAAAGAGCGAAGTAGAATCAGTGTTTGCATCTTGGCACCCGAAGAGCTG
CAAAAAAGCGAGGGATCTCACTCCGACAAGGCAGAGCGGCATATTCTACATCGATCAACC
TATTTTAGGCATCACTGAGGTTTATTGTGACTTGGAGACAGATGGAGGTGGATGGACTGT
TTTTCAAAGACGGGTGGACAGATCGGTTGATTTCTATCGAGGGTGGAACAGCTACATGGA
ATTTGAGATTTTAATCGTTTTGCTTCACCTGGTGACGTTGCAGACAGTTGCCGTCTGTGG
GGACGTAACTGCTGAGAAAACAATCGCGGACAGAAAAATTGCTTCAGCGCTTAGATTGCT
GACTCCGCAGCACTGCGTTAATATCGGAGTGGAGCTGGTGAATATTATTAAACAATCCGG
GAATATTGAAGATATCTCTCGTCTGGAAGACCTTGGCCTTGTCGAAGTCGGTGACGTCAT
CAGAGGGGAGCGGAATTGGACGGTTTTTCAGAGAAGGGTTGACGGCTCTGTAAATTTTTA
TCGCGGCTGGGATCAATACTACGAACTACGGGTCGACTTGGTCCAAACAAATGGCACTGT
CATATACGCAAAGTACAACAATTTTCGAATCGGTCCTGCTACTGACAACTACCGACTGAC
CATCAGTGGATACTCAGGGAACGCGACTGACAGCCTCGAGTATCACGATAGGATGGAATT
TACCACAAACGACAACGACAATGACATTCACTCAGGCATCAATTGCGCTGTCGCCAATAC
AGGAGCGTGGTGGTACAAAAATTGCTACATGAGTAGCCTCAATGGTATTTACGGTTGGAA
CGGCATCACTTGGCGAGACCGAAACAACGGAAATGCAAAAAGAATCATGAGCTTCACTGA
GATGAAATTCAGAAGAAAATCTTGAATTTGGTAGCCTGTATTTTGACCATGGAGTTGGAA
TTTCTTGAAGACGCTGAATTAATTTTTGTCTTCATGTTATATCGTCCTTGTATATTATGA
ACAGAGTTCCATTTCTAGATAGCCGTGGCTTTGCTGTGGTACATCCGTTTTTGGGAAAAA
TTGGGCTACCCGCATCATCATTATTTGTTAGCGAAAATATGTTTCTCTCGTCGCAAACCG
ATCCTATTGCGACTCGAATACGACGTCCGAATTCGGGAGTGTGCCGCTTTTCGTTTTACA
TAATCGGATTATCTTCGTACCGATCTTCGATTTTCTGATAACTGCGACTCGTCTAATTCC
TTATCCTGCAGTTCTTAATTATT
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[110-406] 32.719 |
| Gene3D |
Fibrinogen_a/b/g_C_1 (IPR014716) - T[111-179] 1.4E-17 - T[229-286] 1.3E-7 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[112-178] 7.07E-19 - T[262-404] 2.36E-45 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[128-178] 2.0E-12 - T[286-403] 1.5E-24 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[236-405] 4.7E-35 |
| ProSitePatterns |
Fibrinogen_CS (IPR020837) - T[362-374] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCN1_HUMAN | 37.572 % | 106 | 7.79E-26 |
| FCN2_HUMAN | 40.462 % | 115 | 2.21E-29 |
| FBCD1_HUMAN | 41.243 % | 120 | 4.52E-30 |