- Transcript 'Boleac.CG.SB_v3.S467...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S467.g10230.01.t
Possible name(s)
RDH11; RDH12; RDH14
Gene model
Location
S467 [86,810 / 95,885]
Amino acid sequence
Length: 437
>Boleac.CG.SB_v3.S467.g10230.01.p
MAPSVVGGMVRKDFKLNGKTVLITGANTGIGLATSIDMAERGARVIMACRNKEKGTNARE
AVVEKTQSDNVIVKILDLSSFDSVREFADDINKTEERXDILINNAGVMMCPQMKTKDGFE
MQFGTNHLGHFLLTNLLLDLLKKSAPSRIVTVSSLAHYWYMSGAKIHWDDMNLENNYTPT
RAYGQSKLMNVVEKTQSDNVIVKILDLSSFDSVREFADDMNKTEERLDILINNAGVMMCP
QMKTKDGFEMQFGTNHLGHFLLTNLLLDLLKKSAPSRIVTVSSLAHYWYMSGAKIHWDDM
NLENNYTPTRAYGQSKLMNVLFSRELSKRLEGTGVMTYSVEPGAVATDLQRHVGTHEHPS
LFDRIIGFMNYWTRGWWRTPEQGAQTQIYCAVAPELEKESGRFYSNCKRSTESWDGQRDD
YALRLWEVSEKLTKIKA
Nucleotide sequence
Length: 1,724
>Boleac.CG.SB_v3.S467.g10230.01.t
AGTTTTCCTGATACTTTTTATCTCAAGCTTAACAAGCAATGGCACCTTCAGTAGTTGGTG
GGATGGTTCGCAAAGACTTCAAATTGAATGGAAAAACAGTGTTGATCACAGGAGCGAATA
CTGGCATTGGACTTGCTACATCAATTGACATGGCGGAAAGAGGAGCTAGAGTTATTATGG
CGTGTCGCAATAAAGAAAAAGGAACCAATGCCCGTGAAGCTGTGGTGGAAAAGACACAAT
CGGACAACGTTATCGTAAAGATTTTGGATCTCTCATCGTTTGATTCGGTTAGAGAATTTG
CTGATGATATAAATAAAACTGAAGAGCGTTTNGACATTTTAATAAACAATGCAGGTGTCA
TGATGTGCCCACAGATGAAAACAAAAGATGGATTTGAAATGCAATTCGGCACAAATCACT
TGGGACATTTTCTTCTGACCAACCTTCTCCTGGATTTGTTGAAGAAAAGCGCACCAAGTC
GCATTGTGACAGTCTCATCACTAGCCCACTACTGGTACATGTCTGGAGCCAAGATTCATT
GGGATGACATGAATTTGGAAAACAACTATACACCAACCCGAGCTTATGGTCAAAGCAAAC
TCATGAATGTGGTGGAAAAGACACAATCGGACAACGTTATCGTAAAGATTTTGGATCTCT
CATCGTTTGATTCAGTTAGAGAATTTGCTGATGATATGAATAAAACTGAAGAGCGTTTGG
ACATTTTAATAAACAATGCAGGTGTCATGATGTGCCCACAGATGAAAACAAAAGATGGAT
TTGAAATGCAATTCGGCACAAATCACTTGGGGCATTTTCTTCTGACCAACCTTCTCCTGG
ATTTGTTGAAGAAAAGCGCACCAAGTCGCATTGTGACAGTTTCATCACTAGCCCACTACT
GGTACATGTCTGGAGCCAAGATTCATTGGGATGACATGAATTTGGAGAACAACTATACAC
CAACCCGAGCTTATGGTCAAAGCAAACTCATGAATGTGCTCTTTTCTCGTGAACTCAGCA
AGAGATTGGAAGGTACCGGAGTCATGACCTATTCAGTGGAACCTGGTGCTGTTGCTACTG
ATTTACAACGTCACGTCGGTACCCATGAGCATCCATCCCTTTTTGATCGCATCATAGGGT
TTATGAACTATTGGACTCGTGGATGGTGGAGAACACCAGAGCAAGGAGCGCAGACTCAAA
TATACTGTGCTGTCGCGCCAGAATTGGAAAAGGAGAGTGGACGGTTTTACTCCAACTGTA
AACGCTCTACGGAATCGTGGGATGGACAGCGAGATGATTATGCTCTGCGATTATGGGAAG
TCAGTGAGAAGTTGACGAAGATCAAGGCATAGGACGGTTAGACCTGGGCCTCGGCTTCAA
TTCAATGCAACACATTGAGGTAGCTTTGTACTTGGGCAAGCGCAACAATCAAGATATGCG
TCCAGTCTTTACTAACTATGTGGAAATGGGTAGCAAATTGATTTATAGTCATAGTTACGC
AGCGCCAGCAACGATTCAACAATCGATACACATCTTGAAATTTAGTTTGGTGTCATCACT
GCCTAAGGCCCTAAGCCAATATTACTCAAATTAAAAATCCTTATCTTTAGAATATATATA
GTGTAGCGTATGTTTTGAAATCACAACAGTTCTATCAATATAACGTAATTCTGAAATACT
GATGGTGCATCTGAACTAGAAAATCTGACGCCACAGAGTCTTTG
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[16-190] 2.51E-42 - T[197-410] 1.02E-38 |
| Pfam |
SDR_fam (IPR002347) - T[19-156] 5.6E-25 - T[185-285] 3.8E-13 |
| PRINTS |
SDR_fam (IPR002347) - T[20-37] 3.6E-9 - T[96-107] 3.6E-9 - T[141-157] 3.6E-9 - T[225-236] 7.3E-5 - T[276-284] 7.3E-5 - T[312-331] 7.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 47.951 % | 196 | 2.12E-59 |
| RDH14_HUMAN | 48.305 % | 204 | 3.48E-62 |
| RDH12_HUMAN | 45.85 % | 201 | 3.7E-61 |
