- Transcript 'Boleac.CG.SB_v3.S369...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S369.g08478.01.t
Possible name(s)
NFX1; NFXL1; ZNFX1
Gene model
Location
S369 [123,164 / 126,500]
Amino acid sequence
Length: 1,111
>Boleac.CG.SB_v3.S369.g08478.01.p
MSRHSVRYGGSPGPPIESRLQLRSEASHFVPSSQARAYTYQDARSISLLSQQVNVNDHVY
LPPRVSHPGYGYASGTXXMNYPMDAFYSGNPQYYLPQNGYGIQPHVVDPHGSNYTEWSSP
DMANSTSLEIESRSVNNGSNNKSRRFSKRRNVKEGENTRSRSLQNSRSQQNSASKNEIRF
SHQLKDTDEVASGVQDMVVSTHPMEADDRENEPRKSNSSNRAKKSDPKTSHGKKKKDKLV
KEASATQLGVLIEQLTSGAYECMVCCDRVKQQHAVWSCGNCFHVFHMICIKKWARSPTAH
VEGGGWRCPGCQNVSKKFPSTYKCYCGKVKEPEWNRRETPHSCGEVCGKKRTHNAVCTHP
CNILCHPGPCPQCPASVIKSCLCGKISKKVRCSQQKPLTCEDICGKKKNCGIHTCEVVCH
SGECNECRILIDQSCFCGKYNRQVVCGSEESLLVADGNSGGVYFCEKLCEKMLSCXHHQC
EQACHPGSCPECPXSPANLKTCPCTRTKLADLKDENGNVYERKLCTDPVPTCGEICGKPL
TCGGESVHMCQLECHAGSCPPCATNVSTVFCRCRKSEQEVPCREIPKEPYICDRRCNKKR
KCGRHKCGKICCTDDEHVCMQICGRKLECKLHRCEETCHRGNCHTCYNVSFDELTCHCGA
EVMFPPIPCGTKPPECQKLCARQHSCYHPVNHNCHNEEKCPPCVVLMKKQCNCGKVLRSN
IPCHQTNVSCGAPCKRSLPCGHSCMKLCHPDSCSEEGEICTQPCSIMRVECIHPCALPCH
YGTVCPPSKCKTLITLRCKCGNRQRQVECSESDATLQKLASESIARQHAAVDIRGIFKSA
DGKQVLSCNEECATLERNRRLAEAFDIEASKLQEPEQQKYSPFLLGWVKKDPTFVQWVEQ
ELTNLIDAISWLDQVKRSFNFPTMKREKRQVVHELAEAMNCKSVSVDEEPHRSVVVTAVR
GMSRIPRTLLGDTVNTTKPSMQGFVKAARPDAPVENTSGSQKRLLSSMKLVSMSSPTESS
AGTSSSQSIRRPASIPKMPSNNTSLQSKSTLHGTAYSSVGKQFRGASSSITSSSPRSMTV
AKPPDVSSNHKSGQKPPKKDSVEIDYFDMIE
Nucleotide sequence
Length: 3,336
>Boleac.CG.SB_v3.S369.g08478.01.t
ATGAGCAGACATTCTGTTCGTTATGGTGGCTCTCCTGGGCCTCCCATTGAATCACGCCTT
CAATTAAGAAGTGAGGCAAGTCACTTTGTGCCTTCATCTCAAGCTCGTGCTTACACCTAT
CAAGATGCAAGATCAATTTCATTGTTATCACAACAAGTGAATGTGAACGATCATGTCTAT
CTACCCCCAAGGGTGTCTCATCCTGGGTATGGATATGCTTCTGGCACTCANNCGATGAAC
TATCCTATGGATGCATTTTATAGTGGTAATCCGCAATATTATTTACCACAGAATGGATAC
GGTATACAGCCTCATGTTGTAGACCCGCATGGAAGTAATTATACCGAATGGTCTTCACCA
GATATGGCAAATTCAACCTCTTTGGAAATAGAGAGTAGATCGGTGAACAATGGAAGCAAT
AACAAATCTAGAAGATTCAGTAAACGCCGAAATGTAAAGGAAGGGGAAAACACTCGTAGT
CGCTCTCTTCAAAACTCCAGATCTCAACAAAATTCCGCGTCAAAAAACGAAATTCGTTTC
AGTCATCAACTTAAAGATACTGATGAAGTAGCTTCGGGTGTTCAAGATATGGTAGTTTCT
ACCCATCCAATGGAGGCAGATGATAGAGAAAACGAACCACGCAAATCCAATTCATCCAAT
CGTGCAAAGAAATCTGATCCGAAAACATCTCATGGGAAGAAGAAAAAGGACAAGCTGGTG
AAAGAAGCTTCTGCAACTCAACTAGGGGTATTGATTGAGCAACTTACTTCGGGAGCTTAT
GAATGCATGGTTTGCTGTGACAGAGTTAAACAGCAACATGCCGTTTGGAGCTGTGGGAAT
TGTTTTCATGTTTTTCATATGATCTGTATAAAAAAGTGGGCAAGATCTCCAACAGCTCAT
GTAGAAGGGGGTGGGTGGAGATGCCCTGGCTGTCAAAATGTTAGTAAAAAATTCCCCAGT
ACGTACAAATGTTATTGTGGCAAAGTGAAAGAGCCGGAGTGGAATCGCAGAGAAACGCCT
CACTCCTGTGGTGAAGTTTGTGGAAAGAAGAGAACCCACAATGCTGTTTGCACTCATCCT
TGCAATATTCTGTGCCATCCAGGGCCTTGTCCACAATGTCCGGCTAGTGTCATTAAATCA
TGTCTTTGTGGAAAAATATCAAAGAAGGTTCGGTGTAGTCAACAGAAACCACTGACGTGT
GAGGATATATGCGGAAAGAAAAAGAACTGTGGAATACATACATGTGAGGTCGTTTGTCAC
TCAGGTGAATGCAATGAATGTCGAATTTTAATCGATCAATCTTGTTTTTGTGGGAAGTAT
AATCGTCAAGTTGTGTGCGGCTCAGAAGAGTCACTTCTTGTTGCTGACGGCAACAGCGGT
GGTGTCTACTTTTGTGAAAAATTGTGTGAGAAGATGTTATCNTGCNGACATCACCAGTGT
GAGCAAGCTTGTCATCCAGGATCATGTCCAGAGTGTCCATTNTCACCAGCAAACTTGAAA
ACCTGCCCATGTACTCGTACTAAATTGGCTGATTTGAAGGATGAAAATGGGAATGTATAT
GAAAGGAAACTTTGCACAGATCCTGTTCCTACTTGTGGTGAAATTTGTGGAAAGCCCCTT
ACCTGTGGAGGAGAGTCTGTTCACATGTGTCAACTTGAGTGCCATGCTGGTTCATGCCCG
CCTTGTGCCACAAATGTGTCTACTGTTTTTTGTCGATGCAGAAAATCTGAGCAAGAGGTA
CCATGCAGGGAGATTCCCAAGGAACCNTATATATGTGATCGCAGATGCAACAAGAAACGC
AAGTGCGGTCGGCACAAATGTGGCAAAATTTGCTGCACTGATGATGAACATGTATGCATG
CAAATATGCGGGAGAAAGTTGGAATGCAAGCTGCATAGATGTGAGGAAACGTGTCACAGA
GGGAACTGCCATACTTGCTACAATGTCAGCTTTGACGAGTTGACTTGTCATTGTGGTGCA
GAGGTCATGTTTCCTCCAATTCCATGTGGAACGAAACCTCCCGAGTGTCAGAAATTATGT
GCCAGACAACACTCATGCTATCATCCCGTTAACCATAATTGTCATAATGAAGAAAAATGC
CCGCCTTGTGTTGTGCTCATGAAGAAGCAATGCAATTGCGGAAAGGTACTCCGCAGTAAC
ATTCCATGTCACCAGACCAATGTTTCATGTGGTGCCCCATGTAAAAGGAGTCTTCCCTGC
GGTCACAGCTGCATGAAGTTATGCCACCCTGACTCCTGCTCTGAGGAAGGTGAAATCTGC
ACTCAGCCATGTTCAATCATGCGTGTCGAATGCATTCATCCTTGTGCTCTGCCTTGTCAT
TATGGAACTGTTTGTCCACCGTCCAAGTGCAAAACCTTGATAACTCTCAGGTGCAAGTGT
GGAAATCGGCAGAGGCAGGTTGAATGCTCGGAAAGCGATGCAACCTTACAAAAGCTGGCG
TCTGAATCGATCGCAAGGCAACATGCTGCGGTCGATATCAGAGGAATTTTCAAAAGTGCT
GACGGAAAGCAAGTATTATCATGCAATGAAGAGTGTGCAACATTGGAGCGAAACCGCAGA
CTAGCGGAGGCTTTTGATATCGAAGCATCAAAACTACAAGAGCCAGAACAGCAGAAATAT
TCTCCATTCCTTTTAGGCTGGGTGAAGAAAGATCCAACATTCGTGCAGTGGGTTGAACAG
GAACTTACAAACTTGATTGATGCAATCTCATGGTTAGACCAAGTGAAACGTTCTTTCAAC
TTTCCTACCATGAAGCGAGAAAAGAGGCAAGTTGTTCATGAACTTGCTGAGGCAATGAAC
TGTAAATCTGTAAGTGTGGATGAGGAACCTCATCGAAGTGTTGTTGTGACAGCGGTACGT
GGCATGAGCAGGATCCCCAGAACTCTTTTGGGAGACACTGTCAATACTACTAAGCCAAGT
ATGCAAGGATTCGTGAAAGCTGCCAGACCTGATGCTCCAGTAGAGAATACTTCGGGAAGT
CAGAAGAGGTTACTGAGCTCGATGAAATTAGTTTCCATGTCGTCGCCAACTGAAAGTAGT
GCAGGAACATCTTCAAGTCAGTCAATCAGGAGGCCTGCATCCATTCCAAAGATGCCAAGC
AATAACACCTCATTGCAATCCAAGAGCACTCTACATGGTACTGCTTACTCATCTGTTGGA
AAGCAATTCCGTGGCGCATCTTCATCAATTACCAGTAGTTCACCGAGATCAATGACTGTT
GCTAAACCACCTGATGTTAGCTCTAATCACAAGTCAGGTCAAAAGCCCCCTAAAAAAGAC
TCGGTTGAAATCGACTATTTTGACATGATTGAATGA
| PANTHER |
NFX1_fam (IPR034078) - T[116-1039] 1.9E-296 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[259-314] 8.903 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[262-311] . |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[262-312] 10.763 |
| SMART |
Znf_NFX1 (IPR000967) - T[357-375] 0.17 - T[410-429] 1.3E-4 - T[475-494] 0.4 - T[542-564] 0.073 - T[602-621] 16.0 - T[629-648] 0.3 - T[686-705] 7.2 - T[740-762] 0.006 - T[771-792] 5.3 |
| Pfam |
Znf_NFX1 (IPR000967) - T[358-374] 0.9 - T[410-428] 1.1E-5 - T[475-493] 0.87 - T[542-562] 1.1 - T[602-612] 6.9 - T[623-646] 0.22 - T[740-764] 3.4 |
| SMART |
R3H_dom (IPR001374) - T[878-959] 3.1E-10 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[878-974] 2.16E-14 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[886-963] 9.4E-11 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[892-960] 12.341 |
| Pfam |
R3H_dom (IPR001374) - T[893-957] 1.2E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFXL1_HUMAN | 34.242 % | 252 | 4.8E-70 |
| NFX1_HUMAN | 45.727 % | 700 | 0 |
