- Transcript 'Cisavi.CG.ENS81.R580...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R580.223585-234983.04866.t
Possible name(s)
LASP1; NEB; NRAP
Gene model
Location
R580 [223,584 / 234,963]
Amino acid sequence
Length: 244
>Cisavi.CG.ENS81.R580.223585-234983.04866.p
MNPPCARCKKTVYPTEKLNCLDKMWHKSCFTCETCNLKLTMKTYKGYNKLPYCNTHYPTT
KFTAVSDTPENKRLAQQQKNQSELQYRKVYRLCLGFTQVADTVSNRTGNIYSYVYFTAPH
EVGRHGEVLPENIVNRRQVPGPTHVYAPPKAPQEHISIQQLNCINFLLIQNPQVSAPALS
KSPTLKGDKYKALFDYLAADADEVSFKEGDIVVDVTIIDDGWMEGRVVRTGAYGMMPSNY
VEQV
Nucleotide sequence
Length: 796
>Cisavi.CG.ENS81.R580.223585-234983.04866.t
ATTTATAAGTCCAACTATGAATCCTCCTTGTGCAAGGTGCAAAAAGACCGTTTATCCAAC
GGAGAAGTTAAATTGCTTGGACAAGATGTGGCATAAATCCTGCTTTACTTGTGAGACTTG
TAACCTAAAGCTAACTATGAAGACTTACAAAGGGTACAACAAGCTTCCTTACTGCAACAC
TCACTATCCAACCACAAAATTCACTGCAGTGTCAGATACTCCAGAAAACAAAAGATTGGC
ACAGCAACAAAAAAATCAATCCGAATTGCAGTACAGAAAGGTATACAGGCTATGCTTAGG
TTTCACTCAAGTGGCAGACACTGTTTCGAATCGAACAGGTAACATATATTCATATGTTTA
TTTTACTGCACCACATGAAGTTGGGCGTCATGGGGAAGTCCTTCCAGAAAATATTGTGAA
CAGAAGACAAGTACCTGGTCCCACCCATGTGTATGCACCACCTAAAGCGCCACAGGAACA
TATTTCCATTCAGCAACTTAACTGTATTAATTTTTTATTGATACAGAATCCACAAGTATC
TGCACCAGCTCTGTCGAAGTCACCAACTTTAAAGGGCGATAAGTATAAGGCTCTGTTCGA
CTACCTTGCTGCCGACGCCGATGAAGTTTCTTTTAAAGAAGGTGATATTGTTGTTGATGT
CACCATAATAGACGACGGTTGGATGGAAGGACGTGTGGTTCGCACTGGTGCTTATGGAAT
GATGCCGAGCAACTACGTAGAGCAAGTTTAATAACAACATTGATCTGGTGTATATCCATA
CAGTGTCAATAAATGT
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[3-63] 13.108 |
| SMART |
Znf_LIM (IPR001781) - T[4-56] 1.0E-14 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[5-39] . |
| Pfam |
Znf_LIM (IPR001781) - T[5-58] 8.6E-13 |
| ProSiteProfiles |
Nebulin_repeat (IPR000900) - T[61-91] 9.565 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[172-243] 1.02E-18 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[185-244] 15.808 |
| SMART |
SH3_domain (IPR001452) - T[188-244] 1.7E-13 |
| PRINTS |
SH3_domain (IPR001452) - T[188-198] 2.9E-8 - T[202-217] 2.9E-8 - T[219-228] 2.9E-8 - T[232-244] 2.9E-8 |
| Pfam |
SH3_domain (IPR001452) - T[191-238] 1.7E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NRAP_HUMAN | 46.377 % | 81.3 | 1.44E-17 |
| NEBU_HUMAN | 47.368 % | 88.6 | 5.7E-20 |
| LASP1_HUMAN | 44.061 % | 209 | 1.58E-67 |
