- Transcript 'Cisavi.CG.ENS81.R451...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R451.139947-147158.00036.t
Possible name(s)
NTN1; NTN3; NTN5
Gene model
Location
R451 [140,142 / 146,743]
Amino acid sequence
Length: 516
>Cisavi.CG.ENS81.R451.139947-147158.00036.p
CYDRNKNPQECNPEFENIAHKKRVVVTETCGVDGRDPFCKLVEENGVVSRVCDVCERTGR
RSHPARYLTDINDIGNLTYWQSKTFQPGEDSDREVELTISFGKEYELSYLYMEFASPRPA
AMVIYKSMNHGKTWVPYQHYAKNCRRRFNMAFRTEVNRTNEQEVLCSENFSEVYPYSRGI
IVFNPRDGRPSDEDFDNSYILQEWVTATDVKIVLSGLNDIPPVATRASTTALSYYAINDI
SIGGICKCNGHAERCLMKKGKMVCDCKHKTTGPNCDMCKAFHMDRPPQRATKTDANECIA
CNCNMHAKRCRFNHDLFEKSGRISGGVCVKCRHNTDGRYCHFCKAGYYRNNKTKSISDKR
TCKRNVTSARKATSRPAPSWPHAPVPCPRRCSSARGVRVSLGKFCRMGYAVVVQVTGKLT
LRRKTRFTLQLHKTYKRGVVRFRKKERVDVEVRDRIVHCLCPKLQVKKTYLLIGKYNRSG
GEPRLAIDKGTIVMEWKNKYKRRLRSLQRRARRRKC
Nucleotide sequence
Length: 1,551
>Cisavi.CG.ENS81.R451.139947-147158.00036.t
TGTTATGATAGGAACAAAAATCCACAAGAATGTAACCCGGAGTTCGAGAATATAGCTCAT
AAGAAACGTGTGGTGGTAACAGAGACGTGTGGGGTGGATGGAAGAGACCCGTTCTGTAAG
CTTGTCGAGGAAAATGGCGTCGTTTCTAGAGTTTGTGACGTATGTGAACGAACTGGTCGC
AGGTCGCACCCGGCGCGATACTTGACTGACATCAACGACATAGGGAACCTGACTTACTGG
CAATCCAAGACGTTTCAACCTGGTGAAGATAGCGACCGCGAGGTTGAACTAACAATTTCA
TTCGGGAAGGAATACGAGTTGTCGTATCTCTACATGGAGTTCGCGTCGCCCCGGCCCGCA
GCCATGGTCATATACAAGTCGATGAACCACGGAAAGACGTGGGTTCCGTACCAACATTAC
GCCAAGAACTGTCGCCGGAGATTTAACATGGCGTTCAGAACAGAAGTGAACAGGACAAAC
GAACAAGAAGTTTTATGTTCGGAGAACTTCAGTGAGGTTTACCCGTATAGTCGGGGTATA
ATTGTGTTTAACCCGAGGGACGGGCGACCATCAGATGAAGACTTCGACAACAGTTACATC
CTCCAAGAATGGGTGACTGCCACCGATGTCAAAATCGTTCTGTCCGGGTTGAATGACATC
CCGCCAGTTGCAACAAGAGCAAGCACGACGGCTCTCTCGTATTACGCAATCAATGACATC
AGCATCGGCGGGATATGTAAATGCAACGGCCACGCTGAGAGGTGTTTGATGAAGAAGGGG
AAAATGGTGTGCGACTGCAAGCACAAGACCACGGGGCCGAACTGCGATATGTGCAAGGCA
TTCCACATGGATCGGCCACCACAGCGAGCCACTAAGACCGACGCCAACGAATGCATTGCT
TGCAATTGCAACATGCACGCGAAGAGATGTCGGTTCAACCACGATTTGTTCGAGAAATCT
GGCAGGATAAGCGGAGGGGTGTGTGTGAAGTGTCGGCATAACACTGATGGACGGTACTGT
CACTTCTGCAAGGCTGGATATTATAGAAATAACAAAACCAAGTCGATCTCGGATAAACGG
ACTTGCAAACGAAATGTAACTTCTGCGCGAAAGGCTACAAGCAGACCGGCTCCATCGTGG
CCCCATGCGCCAGTACCTTGCCCGCGGAGATGCAGCAGTGCCCGGGGGGTGAGGGTTTCG
CTCGGGAAGTTCTGCAGGATGGGATACGCTGTCGTCGTGCAGGTGACGGGGAAACTCACG
CTGAGGAGGAAAACCCGCTTCACCCTCCAACTCCACAAGACGTACAAACGAGGCGTCGTT
CGCTTCCGGAAGAAGGAGCGAGTCGACGTGGAAGTCCGGGATCGAATCGTCCATTGTTTG
TGTCCCAAGCTGCAGGTGAAGAAGACTTACCTCCTCATCGGGAAGTACAACCGATCCGGC
GGCGAACCGCGGCTGGCCATCGACAAAGGCACCATTGTGATGGAATGGAAGAACAAATAC
AAGCGGAGATTGCGGAGTTTGCAACGAAGGGCGCGGAGGCGCAAGTGCTGA
| Gene3D |
Laminin_N_sf (IPR038684) - T[1-266] 7.7E-88 |
| SMART |
Laminin_N (IPR008211) - T[5-244] 1.7E-77 |
| ProSiteProfiles |
Laminin_N (IPR008211) - T[7-245] 50.415 |
| Pfam |
Laminin_N (IPR008211) - T[11-244] 2.8E-69 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[62-140] 3.23E-5 |
| Pfam |
Laminin_EGF (IPR002049) - T[246-287] 6.1E-6 - T[301-357] 2.2E-7 |
| SMART |
Laminin_EGF (IPR002049) - T[246-298] 2.4E-5 - T[301-362] 9.6E-7 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[384-516] 8.63E-26 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[387-516] 21.582 |
| SMART |
Netrin_module_non-TIMP (IPR018933) - T[401-510] 2.9E-16 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[403-509] 8.7E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LAMC1_HUMAN | 37.673 % | 267 | 3.59E-78 |
| NET1_HUMAN | 38.84 % | 419 | 3.28E-141 |
| NET3_HUMAN | 33.276 % | 278 | 1.19E-86 |