Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R17.346886-349785.06449.t

Possible name(s)

LOXL2; LOXL3; LOXL4

Gene model

Cisavi.CG.ENS81.R17.346886-349785

Location

R17 [346,885 / 349,785]

Sequences

Amino acid sequence

Length: 202

>Cisavi.CG.ENS81.R17.346886-349785.06449.p
MTSGMLEVQSATDSYWYSVCFDGWSDANSFVACGELGFPSVNSHYSVPGFTAVVITCHGT
ESSLDGCTHVVTSSCQSGRVALSCSLRGIEVTRQIRLRAGAHTGDGRVQVALDSEWGSIC
AGNTWDLRGANVACRQLGYGTARHYFSGEQFGQGHGTIWLTNVECYGNETHIGQCGFERI
SRVHDYSNYSTDGCSQRQLAAI

Nucleotide sequence

Length: 721

>Cisavi.CG.ENS81.R17.346886-349785.06449.t
TTGTTTTCAGTCGGCACTTTACTTGTGTTTTCCTTATGTTTCAACGTTGTACTTGGACAG
TTGATCAGTGACATCAGACTATCTGCGTACAATGAATACACTCGTTTGCCCTTGATGACC
AGCGGAATGCTTGAAGTACAGTCAGCAACAGATTCGTATTGGTACAGCGTGTGCTTCGAT
GGTTGGAGCGACGCCAACTCATTTGTGGCCTGTGGAGAACTCGGGTTTCCTTCTGTGAAT
TCACACTACTCCGTACCTGGTTTCACAGCCGTTGTGATTACCTGCCATGGTACTGAAAGC
TCATTGGATGGATGCACTCACGTGGTGACGTCTTCCTGTCAATCGGGGCGAGTTGCATTA
AGTTGCAGCTTGAGAGGTATAGAGGTAACGCGACAAATACGGCTTCGCGCAGGCGCCCAC
ACGGGTGATGGTAGAGTTCAAGTTGCTTTGGACTCGGAATGGGGTTCGATTTGTGCTGGC
AATACATGGGATCTGAGAGGCGCTAATGTCGCCTGCAGACAACTTGGCTATGGCACAGCT
CGTCACTACTTTTCAGGGGAACAGTTTGGACAAGGCCATGGCACGATATGGCTGACTAAC
GTGGAGTGTTATGGAAATGAAACCCATATTGGCCAATGTGGATTCGAAAGAATTTCTCGA
GTACATGATTACAGCAATTACAGTACGGATGGTTGTTCACAACGCCAGTTAGCTGCTATA
T

InterProScan

Gene3D	SRCR-like_dom_sf (IPR036772) - T[1-85] 3.2E-10 - T[89-202] 9.0E-28
ProSiteProfiles	SRCR (IPR001190) - T[1-85] 14.652 - T[95-202] 22.971
SMART	SRCR-like_dom (IPR017448) - T[2-85] 5.4E-5 - T[95-195] 7.5E-22
Pfam	SRCR (IPR001190) - T[2-85] 6.2E-11 - T[100-185] 1.0E-20
SUPERFAMILY	SRCR-like_dom_sf (IPR036772) - T[2-84] 6.54E-13 - T[93-182] 2.09E-26
PRINTS	SRCR (IPR001190) - T[95-111] 9.2E-10 - T[114-125] 9.2E-10 - T[130-140] 9.2E-10 - T[161-175] 9.2E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LOXL2_HUMAN	29.787 %	101	4.57E-25
LOXL3_HUMAN	33.476 %	108	1.27E-27
LOXL4_HUMAN	32.432 %	104	4.44E-26