Aniseed - Transcript Card

Clone 'cima853k18' >
Transcript 'Cisavi.CG.ENS81.R15....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R15.936673-942797.11064.t

Possible name(s)

COPS7B; EIF3M; PSMD13

Gene model

Cisavi.CG.ENS81.R15.936673-942797

Location

R15 [936,672 / 942,797]

Sequences

Amino acid sequence

Length: 371

>Cisavi.CG.ENS81.R15.936673-942797.11064.p
MSVPAFIDLTETDQIAELQQYLKSRDIKVVEEGELFNDVKQLIISTAEIWKDTDGKDIEG
VVNSILSLLFVIPIAQGSELVDLLCEQLFVGAENGKAPVSLNLLHNLFHGYPSKTAFLYK
VYCTWLKVAKISRSIHLVPTNLKELTSWLESWDVGEEGKQNVLRLLYEAQMTCGRNKDAS
PTMVALLQSYTEDNASKAREDAIRCITKALADPNTYLFNELLTLKPITFLEGELLHDLLN
IFVSGNIKEYDEFYKANKDFVESIGLSHASNTRKMRLLSLVDTLGSAREITFRDIETRLD
IPEAEVEAFIIDAIQSKLVRGRIDHVNSKVIVSQSCQRTFGRAQWEELATRLGQWRDNIN
QVHKKLQTVQM

Nucleotide sequence

Length: 1,352

>Cisavi.CG.ENS81.R15.936673-942797.11064.t
TGAGCCATATGTTGTTCATTTAGGTGTAAAACTATAGTATCACTAATTTAACAAGTTTCC
AAGCAAGTACAAGATGAGCGTCCCTGCATTCATTGACCTAACAGAGACTGATCAGATAGC
GGAGTTGCAGCAATACTTAAAAAGCCGAGATATCAAAGTGGTGGAGGAAGGAGAATTGTT
CAATGATGTTAAACAATTAATTATTTCTACGGCAGAAATTTGGAAAGATACTGATGGAAA
AGATATTGAAGGAGTTGTGAACAGCATCTTGTCCTTGTTATTCGTCATTCCGATTGCCCA
AGGTTCTGAGCTTGTTGACCTTTTATGTGAGCAGTTGTTCGTTGGCGCCGAAAACGGAAA
AGCTCCAGTCAGTTTAAATCTGTTGCACAACCTCTTCCATGGGTATCCGTCGAAAACTGC
ATTCCTTTACAAAGTCTATTGTACTTGGTTGAAAGTTGCTAAAATCAGTAGAAGCATTCA
CCTGGTTCCAACTAATTTAAAAGAGTTGACATCATGGCTGGAGTCATGGGATGTGGGTGA
GGAGGGAAAACAGAATGTGTTGCGGCTCCTCTACGAAGCTCAGATGACGTGTGGAAGGAA
CAAGGATGCCTCTCCTACCATGGTTGCTCTGCTACAGTCCTACACCGAGGATAATGCATC
CAAAGCAAGGGAAGATGCAATAAGGTGCATCACAAAAGCTCTGGCAGATCCAAACACGTA
CTTATTTAATGAACTCTTAACTTTGAAACCTATTACATTCTTAGAGGGAGAGCTTTTACA
TGATCTGCTTAATATATTCGTGAGCGGGAACATTAAGGAATACGATGAGTTTTATAAAGC
GAACAAAGACTTCGTTGAATCCATAGGTTTATCGCATGCCAGTAATACTCGTAAGATGCG
GCTTCTATCATTGGTTGATACGTTGGGTTCGGCACGAGAAATAACATTCCGGGACATCGA
AACTAGACTGGATATACCCGAAGCTGAAGTAGAAGCGTTTATAATCGATGCTATTCAAAG
CAAATTGGTCCGTGGACGAATAGACCACGTCAATAGCAAAGTTATCGTCAGTCAATCATG
TCAGAGAACATTCGGCCGAGCACAATGGGAAGAGCTAGCGACGCGTCTCGGGCAGTGGCG
TGACAACATCAATCAAGTCCACAAGAAATTACAAACTGTACAAATGTAATTGGGGAATTC
CCCGTGAATTTATCGTGTGTTTTTTTTTTCTTGAATTGGAGTTAACATGGTAAGAAAGGT
ATTCTCAAGGTTATTGAGTCTATCGCACATGTGTTGTGTCCGATGAACGGTGTTTCTAAT
CATATTGTTGGGCAAATACAATAAGGATCCGT

InterProScan

Hamap	eIF3m (IPR027528) - T[1-371] 21.684
Pfam	PCI_dom (IPR000717) - T[235-333] 2.3E-16
SMART	PCI_dom (IPR000717) - T[266-355] 2.0E-13
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[273-334] 2.18E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EIF3M_HUMAN	46.883 %	345	1.65E-117