- Transcript 'Cisavi.CG.ENS81.R155...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R155.749374-758407.10411.t
Possible name(s)
CHRD; CHRDL1; CHRDL2
Gene model
Location
R155 [749,373 / 757,909]
Amino acid sequence
Length: 916
>Cisavi.CG.ENS81.R155.749374-758407.10411.p
GCVFGRQYHVIGSSWHPNLGRPFGIMYCVTCHCIKETTGLKPNGEPQDQTRVTCHDVRKD
CPHVTCKGAKVPRGGCCKKSTRSPPPTSSSSSHSSHTFDNNFSSKNEDLSERRKIFTEIS
MNSDDSKANLEEKTKHYVALLTSENQGPLLRATFNLHRDNLHFTIQYLGDQRPSAIEMLT
DDDVIIYTHVTEASPKPGLPIVCGVWRNLPKHVISALDKKSLQLKAVFAEADALNVTSQG
KISRHRALSRETFSSILYPPRDGASGVIAMMSLGRHRFNRLHFAVILRYFILQLYLFTLF
KKAKTVTVRLINHENRTLRSTEMTLPAQIDELAEVWPINSEIHRSLGEGKLRIELVARTT
EARDKVRYIGGIAPKASCDLLQTVLSGSDCNQPASTGAAGSAIFNVNLDNTVTYQVALVG
MSSRVTSISLVGEYRKKRTRVIADITPQFEDGAAQGTLESLNGKELHLLLSDRVRVTVQT
KQSNSGELGGHVTSLLFGGHLARYKGLPIPLAGALVRPPVATGAAGHAWLELNNDCHLYY
EIVVSGLNKERDTTMAAHLHGLAEIAGIEAEHKQLLKGFYGKEAQGILRELTAEIYDHLN
RGTAFVQIATKSNPNGEIRGRVHIPNTCADSSNTDGRSRPIVGSDVTTSRLSDLDPVVHD
GVITDRRLELDPTSCYVTGGWKRHGSEWAPDYDLKCTVCVCESGSVLCDPVFCPELECAR
PVAIEGRCCPVCNDGFGGIPTKDDDGASIGGNLTRVNDLFLYYKPKCCYYGGDGKTYATG
SWWHPYFKRFGHIACVNCTCQPDGEIVCSKITCPAVTCSNPVKRNSGDCCKTCPVGRSRH
EPRDHSMQEDSGTRMCHFGGQLRAPGEKWKLQIPGRRLECIECECATHGLKHKCRRKCPA
VHHACSRVERSVNSCC
Nucleotide sequence
Length: 2,856
>Cisavi.CG.ENS81.R155.749374-758407.10411.t
GGCTGTGTTTTCGGGCGGCAGTACCACGTGATCGGGTCGTCATGGCATCCGAACTTGGGA
CGACCTTTCGGGATAATGTATTGCGTGACGTGTCATTGTATAAAAGAGACCACCGGACTC
AAACCCAATGGCGAACCCCAAGATCAAACAAGAGTGACGTGTCATGACGTCAGAAAAGAC
TGTCCCCACGTCACATGCAAGGGAGCAAAGGTACCCCGAGGGGGTTGCTGCAAAAAATCG
ACCCGTTCACCTCCTCCTACCTCCTCCTCCTCCTCCCACTCCTCTCACACCTTCGACAAC
AACTTTTCGTCCAAAAACGAGGATTTATCCGAGCGACGCAAAATCTTCACTGAGATATCG
ATGAACAGCGACGATTCTAAAGCAAACTTGGAAGAGAAGACAAAGCATTACGTAGCTTTG
CTCACCAGCGAAAACCAAGGACCATTGCTGAGAGCTACGTTCAATCTTCACCGGGATAAC
CTACACTTTACAATCCAATATTTGGGAGACCAAAGACCTTCCGCCATTGAAATGCTCACC
GACGATGACGTAATCATTTACACCCACGTGACCGAAGCTTCACCGAAACCTGGTCTTCCT
ATTGTTTGCGGGGTTTGGAGGAATCTGCCGAAGCACGTGATAAGTGCGCTCGACAAAAAG
TCTCTTCAGCTCAAAGCAGTTTTCGCTGAAGCCGACGCACTTAATGTGACGTCACAGGGG
AAGATATCACGTCACAGAGCACTGAGTCGAGAAACTTTCAGTTCAATTTTATATCCACCG
CGAGACGGCGCCAGTGGGGTGATCGCAATGATGTCATTGGGACGTCATAGATTCAACAGA
TTGCATTTTGCTGTGATTCTAAGGTACTTTATTTTGCAGCTTTATTTATTTACTTTATTT
AAAAAAGCCAAGACGGTTACAGTTCGCTTAATCAACCATGAAAATCGAACGTTACGCTCC
ACTGAGATGACGCTTCCAGCTCAGATTGACGAACTGGCTGAGGTCTGGCCGATCAATTCC
GAAATCCACCGAAGTCTGGGTGAGGGTAAACTTCGGATCGAGCTTGTTGCTAGGACGACG
GAGGCACGTGACAAAGTGCGATACATCGGCGGAATTGCTCCCAAAGCTTCATGCGACTTG
TTGCAAACTGTGTTATCTGGAAGCGATTGCAATCAGCCGGCAAGTACAGGGGCTGCCGGT
TCTGCTATTTTCAATGTAAATCTGGACAACACTGTTACATATCAGGTGGCGCTAGTGGGA
ATGTCAAGTCGCGTCACCTCCATCTCACTGGTGGGGGAATACCGGAAGAAGAGAACACGG
GTCATCGCCGATATAACTCCACAGTTCGAAGATGGCGCTGCTCAAGGAACATTGGAATCA
CTAAATGGAAAAGAGCTGCATCTGCTACTGAGCGACCGGGTCCGGGTGACCGTGCAAACT
AAGCAAAGTAACAGTGGGGAGTTGGGAGGTCACGTGACATCTCTCCTATTCGGTGGGCAT
TTGGCGAGATACAAAGGTCTGCCGATTCCGTTAGCAGGTGCTCTTGTGCGCCCGCCCGTG
GCCACCGGCGCTGCTGGTCACGCTTGGCTGGAGCTGAACAACGACTGCCATCTTTATTAC
GAAATAGTTGTGTCTGGGCTCAACAAGGAACGCGATACAACAATGGCCGCCCATCTGCAT
GGCTTGGCTGAGATAGCTGGGATAGAAGCTGAGCACAAACAACTACTGAAAGGATTTTAC
GGCAAAGAGGCCCAAGGTATACTGAGAGAGTTAACTGCTGAAATTTACGATCATTTGAAT
AGAGGAACTGCATTTGTACAGATCGCGACGAAAAGCAATCCCAACGGCGAGATTCGGGGT
CGTGTGCACATCCCTAACACTTGTGCTGATTCTTCGAACACTGACGGGCGATCAAGACCC
ATTGTGGGTTCTGACGTCACAACTTCAAGGTTGAGTGATTTGGACCCAGTTGTACATGAC
GGGGTAATCACCGACCGACGGTTAGAGTTGGACCCCACTTCATGTTACGTAACCGGAGGT
TGGAAACGCCACGGTAGTGAATGGGCCCCCGATTACGACCTAAAGTGCACAGTCTGTGTT
TGCGAGTCGGGAAGTGTCCTCTGCGATCCAGTATTCTGTCCCGAGCTCGAGTGTGCGAGA
CCTGTTGCCATTGAGGGGCGCTGTTGTCCAGTTTGCAATGACGGGTTTGGGGGAATTCCC
ACTAAAGACGACGATGGGGCTTCAATAGGTGGCAATTTAACGCGAGTAAATGATTTATTT
CTGTATTATAAACCTAAATGTTGCTACTACGGTGGAGATGGGAAAACATACGCAACCGGG
TCATGGTGGCACCCGTATTTCAAGCGGTTCGGTCACATTGCTTGCGTCAACTGCACTTGC
CAGCCTGATGGGGAGATCGTGTGCAGTAAGATCACGTGTCCGGCGGTCACGTGTTCAAAC
CCGGTCAAGCGGAACTCAGGCGACTGCTGCAAAACTTGCCCAGTCGGGCGATCGCGTCAC
GAACCACGTGACCACAGCATGCAAGAAGACAGCGGGACGAGAATGTGTCATTTCGGTGGC
CAGCTGAGGGCGCCAGGCGAGAAGTGGAAATTACAAATTCCCGGACGAAGATTAGAATGC
ATCGAATGTGAATGCGCTACACATGGACTAAAGCACAAATGTCGGCGGAAATGTCCAGCT
GTCCATCACGCGTGCAGTCGTGTGGAACGAAGCGTGAACAGCTGTTGCCCTTGGCGATGC
CTCGACCCAACCCCATGAGCGGGATTCCTTATTTTCAATCCTATTTCACTTTTTACTTTT
GTTCGTTGTCGATGTGTGTTGTTGCGTACGCTTTTA
| PIRSF |
Chordin (IPR016353) - T[1-916] 4.1E-264 |
| SMART |
VWF_dom (IPR001007) - T[2-78] 0.71 - T[675-732] 1.2E-9 - T[768-833] 7.0E-5 |
| ProSiteProfiles |
CHRD (IPR010895) - T[133-247] 13.526 - T[249-375] 9.129 - T[377-497] 18.845 - T[503-627] 20.952 |
| SMART |
CHRD (IPR010895) - T[379-494] 1.1E-18 - T[505-624] 4.6E-29 |
| Pfam |
CHRD (IPR010895) - T[382-492] 9.3E-9 - T[509-622] 1.6E-19 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[673-733] 11.873 - T[766-834] 10.672 |
| Pfam |
VWF_dom (IPR001007) - T[675-732] 3.3E-9 - T[773-833] 1.7E-8 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[696-732] . - T[795-833] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHRD_HUMAN | 34.341 % | 473 | 3.11E-152 |
