- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1667459-1675427.15524.t
Possible name(s)
ABCD2; ABCD3; ABCD4
Gene model
Location
R0 [1,667,461 / 1,674,534]
Amino acid sequence
Length: 538
>Cisavi.CG.ENS81.R0.1667459-1675427.15524.p
RLGLIFFKRLWKILGIIFQRWNSRASILFAILVVLSLLLQFVIYAAGLIPSKYYEVLGAK
DSSRFTELAIYSLLVIVLNALMKSCLTYLSKVLYLTWRQTLCGRLHADYFATMNFYKLNV
LDQKLDNMQRITRDVDQFSREWSLMCSRLVVVPFTLIYYSYQCFISTSWIGPVSIYIYFI
VGTIVNRIIMAPIVRLQVEQEVKEGNFRFQHLQVRVNAESMAFHQAGKTEKLKSNNRLRT
LISTQMSLFNWSFWLNSAVNIFDYVGGILSYLVIAIPIFAGSYDDYAPEEISALISRNSF
VCIYLIYSFSQLIDMSSTVGDMAAHTHRIGQLIESLDTMNNNHPPDEPTSDEQFQVIKTT
MTSAKPVDEKYDVMINTPGKSATLLQNLSVCLSEGKNILVTGPTGSGKTSLLRILAGLWP
VESGSLKRYLNFGTGGVMFLPQKPYLTEGTLQDQFSLLVSTYSVTFCSDYLNWSDKLSPG
EAQRLAFARLFYHSPKLAVLDEPTSGLDTAMTDNLFLSCIKRKITYFTVGHGSTLQKV
Nucleotide sequence
Length: 1,614
>Cisavi.CG.ENS81.R0.1667459-1675427.15524.t
CGACTTGGACTTATATTTTTCAAACGCCTATGGAAAATACTTGGGATTATATTCCAGCGT
TGGAATTCCAGGGCATCAATACTGTTTGCGATTCTTGTGGTGCTTTCTTTATTACTGCAA
TTTGTAATTTATGCTGCTGGGTTGATTCCTTCGAAATATTATGAGGTTCTTGGGGCCAAA
GATTCAAGCAGATTTACAGAGCTTGCCATCTATTCATTACTTGTTATTGTCCTGAATGCT
TTGATGAAAAGTTGCTTGACCTACTTATCCAAAGTTCTGTACCTCACATGGCGTCAAACC
TTATGTGGACGACTCCATGCTGATTATTTTGCGACGATGAACTTCTATAAGTTGAATGTA
CTGGATCAAAAGTTGGATAACATGCAAAGAATAACCAGAGATGTGGACCAGTTCTCCCGA
GAATGGAGTTTGATGTGCAGTAGACTGGTGGTCGTTCCCTTTACCTTGATCTATTATTCC
TACCAGTGTTTCATAAGCACCTCGTGGATAGGCCCTGTGTCTATCTATATTTATTTCATT
GTGGGAACGATCGTCAATCGAATAATAATGGCCCCTATTGTAAGGCTACAAGTGGAACAA
GAAGTAAAAGAAGGTAACTTCAGGTTCCAGCACTTACAAGTAAGAGTAAATGCGGAGTCG
ATGGCCTTTCATCAAGCGGGGAAAACTGAGAAACTAAAAAGCAACAACCGACTACGAACT
CTTATCTCGACTCAAATGTCTCTTTTTAACTGGTCATTTTGGCTGAACTCTGCTGTTAAT
ATCTTTGACTATGTGGGAGGTATTCTGAGCTACCTTGTTATCGCGATTCCAATATTTGCC
GGCAGTTATGACGATTATGCACCAGAGGAAATCAGCGCACTTATCAGCAGGAACTCATTC
GTATGCATCTACCTGATATATTCATTCTCCCAACTAATTGATATGTCAAGTACAGTGGGA
GACATGGCAGCTCATACTCACAGAATCGGTCAACTGATTGAGTCACTGGACACAATGAAC
AACAACCATCCTCCTGATGAGCCGACAAGCGACGAGCAATTCCAAGTCATCAAAACTACC
ATGACATCAGCAAAACCTGTTGATGAAAAGTATGATGTTATGATTAACACTCCTGGCAAA
AGTGCAACGCTTCTGCAAAATCTGTCTGTCTGTTTATCGGAAGGCAAGAATATTTTGGTC
ACTGGACCCACCGGTTCTGGGAAGACTTCCCTTCTTAGGATCCTAGCCGGATTGTGGCCG
GTTGAATCTGGAAGTTTGAAGAGATATTTGAACTTTGGAACTGGAGGTGTTATGTTTTTG
CCGCAAAAACCTTATCTGACAGAAGGAACTTTGCAAGACCAGTTCAGTCTACTAGTATCA
ACATACAGTGTTACATTTTGTTCTGACTACTTGAACTGGAGTGATAAGCTTTCACCAGGA
GAAGCCCAACGTTTGGCCTTTGCTCGGCTGTTCTACCACAGCCCAAAGCTGGCAGTATTG
GATGAACCAACAAGTGGGCTAGATACAGCAATGACGGACAATTTATTCCTGTCGTGCATC
AAGCGGAAAATCACATATTTCACTGTCGGCCACGGGAGTACTTTGCAAAAGGTA
| Pfam |
ABC1_TM_dom (IPR011527) - T[6-279] 1.7E-62 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[8-336] 5.5E-7 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[25-333] 8.11E-13 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[30-284] 12.623 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[365-531] 6.45E-27 |
| Pfam |
ABC_transporter-like (IPR003439) - T[385-505] 9.7E-16 |
| SMART |
AAA+_ATPase (IPR003593) - T[394-531] 5.7E-6 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[477-491] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCD4_HUMAN | 45.184 % | 488 | 9.47E-168 |
| ABCD3_HUMAN | 26.506 % | 180 | 1.99E-49 |
| ABCD2_HUMAN | 25.415 % | 144 | 1.9E-36 |
