- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1667459-1675427.15523.t
Possible name(s)
ABCD2; ABCD3; ABCD4
Gene model
Location
R0 [1,667,458 / 1,675,427]
Amino acid sequence
Length: 590
>Cisavi.CG.ENS81.R0.1667459-1675427.15523.p
PRLGLIFFKRLWKILGIIFQRWNSRASILFAILVVLSLLLQFVIYAAGLIPSKYYEVLGA
KDSSRFTELAIYSLLVIVLNALMKSCLTYLSKVLYLTWRQTLCGRLHADYFATMNFYKLN
VLDQKLDNMQRITRDVDQFSREWSLMCSRLVVVPFTLIYYSYQCFISTSWIGPVSIYIYF
IVGTIVNRIIMAPIVRLQVEQEVKEGNFRFQHLQVRVNAESMAFHQAGKTEKLKSNNRLR
TLISTQMSLFNWSFWLNSAVNIFDYVGGILSYLVIAIPIFAGSYDDYAPEEISALISRNS
FVCIYLIYSFSQLIDMSSTVGDMAAHTHRIGQLIESLDTMNNNHPPGEDANFTYENESFS
EESLILKDEPTSDEQFQVMINTPGKSATLLQNLSVCLSEGKNILVTGPTGSGKTSLLRIL
AGLWPVESGSLKRYLNFGTGGVMFLPQKPYLTEGTLQDQVLYPMQESSTLINDVENNNKI
KEIIDEVGLSDLFYNNSDSVERRELNWSDKLSPGEAQRLAFARLFYHSPKLAVLDEPTSG
LDTAMTDNLFLSCIKRKITYFTVGHGSTLQKHHDVELRFYGDGDWSIITL
Nucleotide sequence
Length: 1,910
>Cisavi.CG.ENS81.R0.1667459-1675427.15523.t
CCCCGACTTGGACTTATATTTTTCAAACGCCTATGGAAAATACTTGGGATTATATTCCAG
CGTTGGAATTCCAGGGCATCAATACTGTTTGCGATTCTTGTGGTGCTTTCTTTATTACTG
CAATTTGTAATTTATGCTGCTGGGTTGATTCCTTCGAAATATTATGAGGTTCTTGGGGCC
AAAGATTCAAGCAGATTTACAGAGCTTGCCATCTATTCATTACTTGTTATTGTCCTGAAT
GCTTTGATGAAAAGTTGCTTGACCTACTTATCCAAAGTTCTGTACCTCACATGGCGTCAA
ACCTTATGTGGACGACTCCATGCTGATTATTTTGCGACGATGAACTTCTATAAGTTGAAT
GTACTGGATCAAAAGTTGGATAACATGCAAAGAATAACCAGAGATGTGGACCAGTTCTCC
CGAGAATGGAGTTTGATGTGCAGTAGACTGGTGGTCGTTCCCTTTACCTTGATCTATTAT
TCCTACCAGTGTTTCATAAGCACCTCGTGGATAGGCCCTGTGTCTATCTATATTTATTTC
ATTGTGGGAACGATCGTCAATCGAATAATAATGGCCCCTATTGTAAGGCTACAAGTGGAA
CAAGAAGTAAAAGAAGGTAACTTCAGGTTCCAGCACTTACAAGTAAGAGTAAATGCGGAG
TCGATGGCCTTTCATCAAGCGGGGAAAACTGAGAAACTAAAAAGCAACAACCGACTACGA
ACTCTTATCTCGACTCAAATGTCTCTTTTTAACTGGTCATTTTGGCTGAACTCTGCTGTT
AATATCTTTGACTATGTGGGAGGTATTCTGAGCTACCTTGTTATCGCGATTCCAATATTT
GCCGGCAGTTATGACGATTATGCACCAGAGGAAATCAGCGCACTTATCAGCAGGAACTCA
TTCGTATGCATCTACCTGATATATTCATTCTCCCAACTAATTGATATGTCAAGTACAGTG
GGAGACATGGCAGCTCATACTCACAGAATCGGTCAACTGATTGAGTCACTGGACACAATG
AACAACAACCATCCTCCTGGTGAAGATGCAAACTTCACCTACGAGAATGAATCCTTCTCT
GAAGAATCACTGATTCTTAAAGATGAGCCGACAAGCGACGAGCAATTCCAAGTTATGATT
AACACTCCTGGCAAAAGTGCAACGCTTCTGCAAAATCTGTCTGTCTGTTTATCGGAAGGC
AAGAATATTTTGGTCACTGGACCCACCGGTTCTGGGAAGACTTCCCTTCTTAGGATCCTA
GCCGGATTGTGGCCGGTTGAATCTGGAAGTTTGAAGAGATATTTGAACTTTGGAACTGGA
GGTGTTATGTTTTTGCCGCAAAAACCTTATCTGACAGAAGGAACTTTGCAAGACCAGGTT
CTTTATCCGATGCAAGAATCATCCACTCTTATAAACGATGTTGAAAATAACAATAAAATA
AAAGAAATAATAGATGAAGTTGGACTAAGCGATTTGTTCTATAACAATTCCGATTCAGTT
GAAAGGAGAGAGTTGAACTGGAGTGATAAGCTTTCACCAGGAGAAGCCCAACGTTTGGCC
TTTGCTCGGCTGTTCTACCACAGCCCAAAGCTGGCAGTATTGGATGAACCAACAAGTGGG
CTAGATACAGCAATGACGGACAATTTATTCCTGTCGTGCATCAAGCGGAAAATCACATAT
TTCACTGTCGGCCACGGGAGTACTTTGCAAAAGCATCATGATGTGGAATTACGCTTCTAT
GGAGACGGAGATTGGTCAATAATCACCCTACTTTAGACTAAAACGTATGGATGTATTAGG
TGCAATAAAAATATGATTTCTTGTGTTTTAAATTTCCTTTCTTGATTTTAAAATATGATT
TATTGGTAAAGTGCCATGGCTGTATTTTTAATTGTCTTTTTCGCTGTACT
| Pfam |
ABC1_TM_dom (IPR011527) - T[6-280] 8.7E-63 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[9-337] 7.0E-7 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[9-316] 3.01E-13 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[31-285] 12.623 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[374-590] 13.285 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[382-576] 1.91E-29 |
| Pfam |
ABC_transporter-like (IPR003439) - T[390-539] 3.2E-20 |
| SMART |
AAA+_ATPase (IPR003593) - T[399-584] 1.1E-9 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[511-525] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCD4_HUMAN | 45.623 % | 527 | 0 |
| ABCD3_HUMAN | 27.842 % | 212 | 1.5E-60 |
| ABCD2_HUMAN | 26.045 % | 175 | 8.64E-47 |
