- Transcript 'Boleac.CG.SB_v3.S101...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S101.g00430.01.t
Possible name(s)
BARHL1; BARHL2; NKX1-2
Gene model
Location
S101 [32,972 / 33,983]
Amino acid sequence
Length: 313
>Boleac.CG.SB_v3.S101.g00430.01.p
MPQSHSPTSMEVKKRPRTAFTPEQIKRLENEFQKNKYLSVGKRMELSKGLKLTETQIKIW
FQNRRTKWKREYLSEWEVWAHQNYYAMHGLYGAAAAASALAVASPMTGIPRPHPGMMAPP
GIPTSPYGDHVPGVLKPPTPFSHPSIMLQSPTQSRISPQSQLSPPSTKPGALLSSRLPGN
GPAPMIPIPLNSQAMLPQLPFYFLPNPMYSAVAANSRLTVEAHQSQFAENWPPPPPHSVS
SPLSQESSSSIPLSNGSPLVPSSAKLSPPLFKRSDAERQSYFKTSVNAVLCGPRHSRIIL
PETATGNNPLGYR
Nucleotide sequence
Length: 941
>Boleac.CG.SB_v3.S101.g00430.01.t
GTATGCCTCAGTCACATTCACCAACGTCCATGGAGGTGAAAAAACGACCGAGAACGGCCT
TCACTCCAGAACAAATAAAAAGATTAGAAAACGAATTTCAAAAAAACAAATATCTATCNG
TTGGGAAAAGAATGGAGCTATCCAAAGGTTTAAAGCTAACAGAGACGCAGATAAAGATTT
GGTTCCAAAATCGAAGGACAAAATGGAAGCGAGAATATCTTAGCGAGTGGGAAGTGTGGG
CTCATCAAAATTATTACGCGATGCATGGACTTTACGGTGCTGCAGCAGCGGCGTCTGCAC
TTGCAGTAGCATCTCCCATGACAGGAATTCCACGTCCACATCCCGGAATGATGGCGCCTC
CAGGGATACCAACAAGTCCGTACGGCGATCATGTTCCGGGCGTTTTGAAACCACCGACGC
CGTTTAGTCACCCAAGCATTATGCTTCAATCCCCGACACAGTCACGGATTTCACCGCAAA
GTCAGCTTTCGCCACCGTCAACAAAGCCTGGTGCTTTGCTATCTTCGAGACTGCCTGGAA
ATGGACCGGCGCCCATGATACCGATACCATTAAACTCTCAGGCTATGCTGCCTCAATTGC
CATTTTACTTTTTACCGAATCCTATGTATTCTGCGGTTGCTGCTAATTCCCGTTTGACCG
TAGAAGCCCATCAGTCTCAATTTGCTGAAAATTGGCCGCCTCCCCCACCCCATTCAGTTT
CAAGCCCACTTTCACAAGAAAGCTCCTCAAGCATACCGTTATCGAACGGATCTCCACTTG
TACCGAGTTCAGCAAAATTATCTCCCCCATTGTTCAAAAGGTCAGATGCAGAACGGCAAT
CATACTTCAAGACAAGCGTTAATGCTGTCTTATGTGGTCCGCGACATTCTCGCATAATCC
TACCGGAAACCGCAACAGGAAATAACCCATTAGGATATCGC
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[6-71] 6.42E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[11-71] 21.589 |
| SMART |
Homeobox_dom (IPR001356) - T[13-75] 1.2E-25 |
| Pfam |
Homeobox_dom (IPR001356) - T[14-70] 5.8E-23 |
| CDD |
Homeobox_dom (IPR001356) - T[14-71] 2.62988E-25 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[35-46] 1.4E-7 - T[50-60] 1.4E-7 - T[60-69] 1.4E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[46-69] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BARH1_HUMAN | 46.512 % | 90.1 | 1.18E-20 |
| BARH2_HUMAN | 46.835 % | 87.8 | 1.62E-19 |
| NKX12_HUMAN | 62.069 % | 84.7 | 8.29E-19 |
