- Transcript 'KH2012:KH.C14.120.v2...' >
- Transcript 'Cisavi.CG.ENS81.R21....' >
- Clone 'cima820092' >
- Transcript 'Moocci.CG.ELv1_2.S57...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S578361.g22947.02.t
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
S578361 [5,768 / 23,324]
Amino acid sequence
Length: 1,104
>Moocci.CG.ELv1_2.S578361.g22947.02.p
MGSAENVEDNHAEMVRCIKCQVKAIMEEAVTKKFVHEESSHVIRLCGTINSCMISKLKKR
YSGFLKTNKVANLFNNIGKTVPAVAELVVKIEEALEADAQSQRRLENTDFTKPLRQPHHL
KFFWVRMALTEKLLDKILDNLVQNSRKYYEKSAILADPVNGPLIASIMVGPCALDYTKMK
TTDHYWSDPPADELMQRQRLHSRNSSPNSPGKRPTLHMRYFNSDSMNGEKILHDENMLAA
SSFRDYVESLHQNSKTTLLYGKNNVVVQPKEDIGPIPGYLSLHQDVGSIFIKWTPNQLMN
NNNNPSNGHLHKQSAHYVDENRSYWKFIMSINIRDVVYLHCHQQQDKSGTVVFVGQDGVQ
HPPICFPPGGHLLAFLTCLEAALLPRGHLDPPLRSQRGKGKVFPRIRNGGSTSSSGSQIS
TGSQFSQSEIEEPTDFVFRVTLGNVRDKNNSFMKNHQKAKNSFIQNVQSRHQSWIRSRIS
YSDLQYLEDSPVPHAVDTYNPLSTHHEFTFEHTNGSADIETARNRHANSTVYSNTSLKTL
CDTMKRQIISRAFYGWLGYSRQLSAVRTHLSALVNDEITQPCQPVNATVGVTKETWEQHL
YNGKITNIKELMRHVYFGGIDHDMRKTVWPFLLKHYPMDSTVDERNNLDLQTKINYEEIM
TEWLAVEVIVKQREREAVNLAKLSTGGTASTSSTSSFDHHRKQSTGTINEVFVSLDKDPP
LSTVNSINEEEKAIHSSSPDYSEYYIIKNEKSQPVNIGHRRKRTLLDMSTKSHTPYSSVS
TDLTVSEDIVSSSLPSVTENSSSTDRRYLNKSNAAVNFKKSMNKHLRKQAIVESLDEASH
EEEDTGFDSAADDVSMSSSSTEESVSSVQGFTYSSELLDDFGLNLHRIEKDVHRCDRNHI
YFTVEGNLDKLRNVMCSYVWKNLSVGYMQGMCDIAAPLLIIFDDESKVYSCFTHLMKRMG
VNFPNGGAMDTHLANVRSLLQVLDPELYEHMHQNGDYTHFYFCYRWFLLDFKRELSYKDD
VFAVWERIWSAEYCSSNHFGIFFALAMLNNYRNIILDNDMDFTDIIKFFNEMAERHDAKK
IIKLAQNFVSDVQLMIHNRKVTIM
Nucleotide sequence
Length: 3,487
>Moocci.CG.ELv1_2.S578361.g22947.02.t
TTGTTTTAAAAGATTTACTTATTTTAATACTAATTTCCCTTCTAGCAGTCTAGATACTGC
TACGAGAAACCTAATGTAATACCGGTCAGCCGGTACTGGTACGCTCACTAATTTGCTACT
TGAGGCAAACTGGCGGACGTCCGACAGTCCGACCAATTTCTAAAAGTTAAACATGGGTTC
CGCAGAAAACGTGGAAGATAACCATGCGGAAATGGTGCGGTGTATAAAGTGTCAAGTAAA
AGCTATAATGGAAGAGGCGGTTACTAAAAAATTTGTTCACGAAGAAAGCTCACATGTTAT
ACGTTTATGTGGAACTATCAATTCATGCATGATAAGCAAATTAAAAAAACGATATAGTGG
ATTTCTAAAAACGAATAAAGTTGCGAACTTGTTTAACAACATAGGTAAAACAGTACCTGC
TGTTGCTGAACTTGTTGTAAAAATTGAGGAAGCTTTGGAAGCGGATGCACAAAGCCAAAG
GCGTTTGGAAAATACTGATTTTACCAAACCATTACGCCAACCACATCACTTAAAGTTTTT
TTGGGTGAGAATGGCATTAACTGAAAAACTGTTGGATAAGATCTTGGATAATTTAGTGCA
AAATTCAAGAAAATACTACGAAAAATCAGCAATATTAGCAGACCCTGTAAATGGCCCACT
AATTGCATCAATTATGGTGGGGCCATGTGCATTGGACTACACCAAAATGAAAACTACAGA
TCATTACTGGTCAGATCCACCTGCTGATGAGCTTATGCAAAGACAAAGACTACATTCAAG
GAATTCTTCCCCAAATTCTCCTGGCAAAAGACCAACTTTACACATGCGTTATTTTAATTC
TGATTCAATGAATGGAGAAAAGATTTTGCATGATGAAAATATGCTTGCTGCCTCATCATT
TAGGGATTATGTTGAGTCTCTTCATCAAAATTCTAAAACCACCTTGTTATATGGAAAAAA
TAATGTGGTTGTGCAGCCGAAAGAAGATATAGGTCCAATTCCTGGTTACCTTTCTCTACA
CCAAGATGTTGGATCTATATTTATAAAATGGACACCGAACCAACTCATGAACAATAACAA
TAACCCAAGTAATGGGCATTTACACAAACAATCTGCACACTATGTTGATGAAAACAGATC
TTACTGGAAATTTATTATGAGCATAAATATTCGGGATGTGGTTTATCTACATTGTCATCA
GCAACAGGACAAAAGCGGCACAGTAGTTTTTGTTGGTCAGGATGGCGTCCAACACCCCCC
CATATGTTTTCCTCCTGGTGGTCATCTTTTAGCTTTTCTAACATGCTTGGAAGCAGCACT
TCTACCAAGAGGACACCTGGACCCACCATTAAGATCACAACGTGGAAAGGGCAAAGTTTT
TCCACGAATTCGAAATGGTGGTAGTACCAGTAGTTCTGGCAGTCAAATAAGTACTGGTAG
CCAGTTTAGCCAGTCAGAAATTGAAGAACCAACGGACTTTGTGTTTCGAGTCACTCTGGG
AAATGTGCGTGACAAGAACAATTCTTTTATGAAAAATCACCAAAAAGCTAAGAATAGCTT
CATACAGAATGTCCAAAGTAGACACCAGAGTTGGATTCGATCTCGAATTTCTTATTCTGA
TCTTCAATATTTAGAAGATTCCCCTGTTCCTCATGCAGTCGATACATATAACCCTTTGTC
AACTCATCATGAGTTTACGTTTGAGCATACAAATGGGTCTGCTGATATAGAAACAGCAAG
AAACAGACATGCTAACTCAACTGTTTATTCGAATACATCGTTAAAAACCCTTTGTGACAC
AATGAAACGACAAATAATATCTCGTGCTTTCTATGGTTGGCTTGGCTACTCTCGACAATT
ATCAGCTGTAAGAACACATTTATCGGCATTAGTTAACGATGAAATCACTCAACCATGCCA
ACCCGTCAATGCCACTGTTGGAGTTACCAAGGAAACATGGGAACAACATTTATATAATGG
AAAGATAACAAATATTAAGGAGTTAATGAGGCATGTATATTTTGGGGGCATTGATCATGA
CATGCGGAAAACAGTTTGGCCGTTTTTACTAAAGCATTACCCAATGGATTCGACTGTTGA
TGAAAGAAATAATCTGGATTTGCAGACTAAAATTAATTATGAAGAAATAATGACAGAATG
GTTGGCTGTTGAGGTCATTGTAAAACAGCGTGAACGTGAAGCAGTGAACCTTGCAAAATT
GTCAACTGGGGGAACAGCAAGCACCAGCTCAACTTCGAGTTTTGATCACCACCGAAAACA
GTCAACTGGGACAATAAACGAAGTTTTTGTTTCACTTGATAAAGATCCCCCTTTGTCAAC
TGTAAATTCTATAAATGAAGAAGAAAAGGCAATCCACTCGAGCTCTCCAGATTATTCAGA
ATATTATATTATAAAAAATGAAAAATCTCAACCAGTTAATATTGGCCATCGCAGAAAAAG
AACTTTGTTAGATATGTCAACTAAAAGCCACACCCCATACTCTTCCGTTAGTACAGATTT
AACAGTTAGTGAGGATATTGTGTCGAGTTCATTGCCAAGTGTAACTGAAAATTCTTCAAG
TACTGATCGACGATATTTAAATAAGTCTAATGCAGCTGTGAATTTCAAAAAGAGTATGAA
TAAGCATTTACGAAAACAAGCCATTGTAGAAAGTCTGGACGAAGCATCACACGAAGAAGA
AGACACTGGTTTTGATTCAGCAGCAGATGATGTCAGCATGAGCAGTAGCTCAACGGAAGA
ATCAGTTTCATCAGTTCAAGGTTTTACTTATTCCTCTGAATTGTTGGATGACTTTGGCCT
GAATCTTCACCGCATTGAGAAAGATGTACATCGATGCGATCGGAACCACATTTACTTTAC
GGTTGAAGGAAATCTTGACAAACTGCGGAATGTTATGTGCAGTTATGTTTGGAAAAATCT
TAGTGTTGGATACATGCAGGGTATGTGTGATATTGCAGCACCCCTTTTGATTATATTCGA
TGATGAGAGCAAAGTATACAGCTGCTTCACCCATCTTATGAAGAGGATGGGGGTAAACTT
TCCAAATGGGGGGGCTATGGACACGCATCTTGCGAATGTCCGCTCATTATTACAGGTTCT
GGATCCAGAATTGTATGAACACATGCATCAAAATGGAGATTACACTCACTTTTACTTCTG
TTATCGTTGGTTTTTGTTAGATTTTAAAAGAGAATTGTCCTATAAAGACGATGTGTTTGC
TGTTTGGGAAAGGATATGGTCGGCTGAATATTGTTCGTCCAATCATTTTGGAATATTTTT
TGCTTTAGCGATGCTCAACAATTATCGAAATATTATTCTTGATAATGATATGGACTTCAC
CGATATTATTAAGTTTTTTAATGAAATGGCTGAACGTCATGATGCCAAAAAGATCATAAA
ATTGGCGCAAAATTTTGTGTCTGATGTTCAACTGATGATCCATAATCGCAAAGTTACTAT
CATGTAA
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[11-192] 3.66E-21 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[36-184] 16.897 |
| Pfam |
Run_dom (IPR004012) - T[44-181] 5.3E-24 |
| SMART |
Run_dom (IPR004012) - T[121-181] 4.3E-13 |
| CDD |
SGSM1/2 (IPR037745) - T[256-442] 8.68271E-79 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[594-658] 7.06E-44 - T[871-990] 7.06E-44 - T[967-1087] 5.23E-28 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[616-1059] 1.3E-33 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[619-1032] 30.048 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[865-1055] 8.8E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 43.797 % | 925 | 0 |
| SGSM2_HUMAN | 43.1 % | 888 | 0 |
| TBC15_HUMAN | 30.233 % | 126 | 1.19E-29 |