- Transcript 'KH2012:KH.C2.216.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C5.42.v3.A...' >
- Transcript 'KH2012:KH.C3.124.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S54...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S542113.g20781.01.t
Possible name(s)
YBX1; YBX2; YBX3
Gene model
Location
S542113 [5,588 / 7,668]
Amino acid sequence
Length: 125
>Moocci.CG.ELv1_2.S542113.g20781.01.p
MTEVENVPGDAEEAPIKSEKTVLATKCTGVVKWFNVRNGYGFINRDDNKEDVFIHQTAII
RNNPRKYLRSVGDGEVVQFDVVEGDKSWYVYNHVGFIRNAEVYYQLPVFVQFKFYTKVLA
LRMPI
Nucleotide sequence
Length: 378
>Moocci.CG.ELv1_2.S542113.g20781.01.t
ATGACCGAAGTGGAAAATGTTCCTGGTGATGCCGAAGAGGCTCCCATTAAATCAGAAAAG
ACCGTGCTAGCTACCAAATGCACGGGTGTTGTGAAGTGGTTCAATGTAAGAAACGGCTAT
GGCTTTATCAACCGGGATGACAACAAGGAGGATGTTTTCATCCATCAAACTGCTATCATC
CGAAACAACCCCCGAAAATATCTTCGGAGCGTAGGTGATGGAGAAGTCGTACAATTTGAT
GTGGTTGAAGGTGATAAGTCATGGTATGTGTACAATCATGTTGGTTTTATTCGAAATGCA
GAAGTTTACTATCAACTTCCTGTTTTTGTTCAATTTAAGTTTTATACAAAGGTTTTGGCA
TTAAGAATGCCCATATGA
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[23-92] 2.57E-19 |
| Pfam |
CSP_DNA-bd (IPR002059) - T[27-86] 1.5E-20 |
| CDD |
CSP_DNA-bd (IPR002059) - T[27-86] 3.19164E-19 |
| SMART |
CSD (IPR011129) - T[28-96] 2.8E-15 |
| PRINTS |
CSP_DNA-bd (IPR002059) - T[29-44] 2.7E-18 - T[50-59] 2.7E-18 - T[69-87] 2.7E-18 |
| ProSitePatterns |
Cold-shock_CS (IPR019844) - T[40-59] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| YBOX1_HUMAN | 70.732 % | 128 | 2.94E-37 |
| YBOX3_HUMAN | 74.359 % | 126 | 4.54E-36 |
| YBOX2_HUMAN | 63.158 % | 123 | 5.2E-35 |