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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S52...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S525700.g19909.01.t

Possible name(s)

RDH12; RDH13

Gene model

Moocci.CG.ELv1_2.S525700.g19909

Location

S525700 [5,166 / 8,770]

Sequences

Amino acid sequence

Length: 212

>Moocci.CG.ELv1_2.S525700.g19909.01.p
MAGIDKTSSKNGWVTSDVKLTGKTVIITGCNTGIGLETAIDMAKREAKVKMACRNMENAE
VAKERIMGESKSDKVFIKQLDLGSLKSVRKLAEDINNTEERLDILINNAGIMRCPQSKTE
DGFEKQMGTNHLGHFLLTNLLLDLLKKSSPSRVVVLSSVVGEEFYVEDIQWDDIQSENNY
GEWSAYFQSKLMNLMFAKELNDRYEVQAHAQN

Nucleotide sequence

Length: 639

>Moocci.CG.ELv1_2.S525700.g19909.01.t
ATGGCTGGGATAGACAAAACTAGTTCTAAAAATGGCTGGGTAACGAGCGATGTTAAACTA
ACAGGTAAAACTGTGATCATAACTGGATGTAACACTGGGATCGGACTCGAAACCGCCATT
GATATGGCAAAGAGAGAAGCCAAGGTTAAAATGGCTTGTAGGAACATGGAGAATGCAGAA
GTTGCCAAAGAAAGGATCATGGGGGAATCAAAATCAGACAAAGTTTTTATAAAGCAACTG
GATTTAGGTTCTCTTAAATCTGTTCGCAAACTTGCTGAAGATATCAACAATACTGAAGAA
CGACTTGATATACTTATAAATAATGCCGGTATAATGAGATGTCCACAATCTAAGACAGAA
GACGGATTTGAAAAACAAATGGGAACAAATCATCTTGGCCATTTCTTACTGACCAATTTA
TTGTTGGACTTGCTAAAAAAAAGTTCTCCGAGTCGTGTGGTCGTATTGTCTTCTGTCGTA
GGTGAAGAGTTTTACGTGGAAGACATTCAATGGGATGACATACAGTCTGAGAATAATTAC
GGAGAGTGGTCAGCCTACTTCCAAAGTAAATTAATGAATTTAATGTTTGCCAAAGAACTC
AACGATCGCTATGAAGTGCAGGCACATGCACAGAATTAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[20-204] 7.7E-43
Pfam
SDR_fam (IPR002347) - T[23-163] 1.3E-26
PRINTS
SDR_fam (IPR002347) - T[24-41] 2.6E-10 - T[100-111] 2.6E-10 - T[145-161] 2.6E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 46.632 % 167 4.34E-51
RDH13_HUMAN 50.761 % 177 1.0E-54
RDH12_HUMAN 48.969 % 173 2.34E-53