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TRANSCRIPT CARD

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  1. Clone 'cien45562' > 
  2. Transcript 'KH2012:KH.C3.425.v1....' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Moocci.CG.ELv1_2.S40...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S409007.g12167.01.t

Possible name(s)

DNER; NOTCH2; NOTCH3

Gene model

Moocci.CG.ELv1_2.S409007.g12167

Location

S409007 [14,621 / 16,873]

Sequences

Amino acid sequence

Length: 548

>Moocci.CG.ELv1_2.S409007.g12167.01.p
MLQDHFNPLRSGQCVCVTGFTGSRCEQESRINIPPYNQCSYGTCPQDAKCEPLQIQNGIG
WKCVQMYRNVCESMPCLNGGTCSRVNFANGINSETFQCQCPPGYSGRTCEIPPTQRPPIP
SSVCSTNPCQNGCQCTPSCRHSKGYYCKGTSGFLGKNCDIRKYEVQLAVCFLNTVVLASP
VLTCAPGFVQLRIDPAFVAQYDRGVPNGYLQASSGMNNLGSNDPSCMATSSSFNIPLHSG
ICGITKTVTADGVTYQGTVWYNRRINNGGFDMPIPVVQFFCRYTTEYDIITSLQPAVDKP
VNIVDYGKSVQQGTIDLCKVEYSCPNPCPTQFRVTGGAIYTVGEMIHLNIRSGSTGSNQN
EHSAVESLYVSCASSQNANPEVVLIQSGCPATSLPNYMPTKVTHNALTDCVCVSFQVPRL
SSCNIVYIHAKLTNCFGKITSACPGGSQHCANRYRRAARYNDSIVDIFGPIYFVDEAPGK
GELILFPNKTIVAMDTPLLEELEDIEIPQTKPSAELWIMGTLAVIFLVFSALSISYAVFK
LLSNRLKV

Nucleotide sequence

Length: 1,688

>Moocci.CG.ELv1_2.S409007.g12167.01.t
ATGTTGCAAGATCATTTTAATCCGTTACGTAGTGGCCAGTGCGTTTGTGTGACGGGTTTT
ACCGGATCTAGATGCGAGCAAGAAAGCCGTATTAATATACCACCATACAATCAATGTTCC
TATGGTACGTGCCCACAAGACGCTAAATGCGAACCGTTACAGATACAAAACGGAATAGGT
TGGAAATGTGTTCAAATGTACCGGAACGTTTGCGAATCCATGCCTTGTTTAAATGGTGGT
ACTTGCAGCCGGGTCAACTTTGCGAACGGGATAAACTCTGAAACTTTTCAATGCCAGTGT
CCGCCTGGTTACAGTGGGAGAACTTGCGAAATTCCTCCGACACAGAGGCCGCCAATACCA
TCTTCTGTGTGTTCCACAAACCCGTGTCAGAATGGATGTCAATGCACTCCTTCATGTCGC
CATTCTAAAGGATATTATTGTAAGGGAACGTCTGGGTTTTTAGGAAAAAATTGCGACATT
CGTAAGTACGAAGTACAATTAGCAGTTTGTTTTCTAAATACAGTTGTTTTAGCCTCGCCG
GTATTGACCTGTGCCCCTGGTTTCGTGCAGCTTCGAATCGATCCTGCGTTTGTGGCGCAG
TATGACCGTGGTGTTCCCAATGGTTATTTACAGGCTTCTTCTGGTATGAACAACCTTGGT
TCAAACGATCCATCCTGTATGGCAACTTCCAGCAGTTTTAACATTCCTCTTCACTCCGGT
ATTTGTGGCATTACTAAAACTGTAACCGCTGATGGCGTAACTTACCAGGGAACCGTATGG
TACAACCGCAGAATTAATAATGGTGGATTTGACATGCCTATTCCCGTCGTACAATTTTTC
TGCCGTTACACTACTGAATACGATATTATCACATCTCTTCAACCAGCGGTGGACAAGCCG
GTAAACATTGTAGACTATGGAAAGTCCGTCCAGCAAGGTACTATCGATTTATGCAAAGTT
GAATATTCGTGCCCAAATCCCTGTCCAACACAGTTCAGGGTTACTGGTGGTGCGATTTAC
ACAGTAGGCGAGATGATTCACTTGAACATTCGTTCCGGATCTACTGGATCTAACCAAAAC
GAGCATTCTGCAGTCGAATCGCTGTACGTTTCTTGCGCGTCTTCTCAAAACGCCAATCCA
GAAGTTGTCCTGATACAATCTGGCTGTCCGGCAACCAGTTTACCCAACTATATGCCAACG
AAGGTTACTCACAATGCCCTCACGGATTGTGTATGTGTGTCTTTCCAAGTTCCTAGATTA
AGCAGTTGCAATATCGTCTACATTCACGCTAAATTAACCAACTGTTTTGGAAAGATAACC
TCGGCTTGCCCTGGCGGTTCGCAACACTGCGCAAATCGGTATCGCCGAGCTGCAAGATAC
AATGATTCCATAGTGGATATATTTGGTCCAATTTATTTTGTAGATGAAGCTCCTGGTAAG
GGGGAGCTAATACTGTTTCCAAACAAAACCATCGTTGCCATGGATACTCCGTTGCTTGAG
GAATTGGAAGATATTGAAATTCCGCAAACTAAGCCGTCTGCAGAGCTATGGATCATGGGA
ACATTAGCAGTTATTTTTCTTGTGTTTTCAGCTTTAAGTATATCTTATGCTGTGTTTAAA
TTGCTTTCAAATCGTTTAAAAGTATAAATGTTTTTTAAATGTCTTAAATACAGAATAATG
TGTTCTGA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[1-26] 8.753 - T[67-110] 18.91
ProSitePatterns
EGF-like_CS (IPR013032) - T[14-25] . - T[14-25] . - T[98-109] . - T[98-109] .
SMART
EGF-like_dom (IPR000742) - T[70-110] 1.2E-6 - T[123-159] 130.0
Pfam
EGF-like_dom (IPR000742) - T[71-108] 4.8E-8
ProSiteProfiles
ZP_dom (IPR001507) - T[183-457] 11.019

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value