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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Moocul.CG.ELv1_2.S89...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S89176.g06999.01.t

Possible name(s)

RPL23A

Location

S89176 [16,179 / 18,250]

Sequences

Amino acid sequence

Length: 146

>Moocul.CG.ELv1_2.S89176.g06999.01.p
MAVSKAASDKALKAKKAVLKGVHSHKKRRVFTKVKFYKPKTLKLPRTPRYPRKSTQNRNK
MDQFAIVKHPLTTESAMKKIEDNNTLVFIVDLKANKPQIKQAVKQLYEVDIARVNTLIRP
DGKKKAYVKLAPDYDALDVANKIGII

Nucleotide sequence

Length: 533

>Moocul.CG.ELv1_2.S89176.g06999.01.t
CTTCACGAAAAAAACTAGAATCCACGTTCTTTTCTGTGTAAGACACAAGTAATGGCAGTT
TCCAAAGCAGCGAGCGATAAGGCCTTGAAGGCCAAAAAGGCCGTCTTGAAGGGAGTCCAC
TCCCACAAGAAACGTCGTGTTTTCACAAAGGTCAAGTTTTACAAGCCAAAAACTTTGAAA
TTGCCGAGAACTCCAAGATATCCACGAAAATCCACACAAAACAGGAATAAAATGGATCAG
TTTGCGATTGTGAAACATCCATTGACAACTGAGAGCGCTATGAAGAAGATTGAAGACAAT
AATACGCTCGTCTTCATCGTGGACCTCAAGGCTAACAAGCCCCAAATCAAGCAAGCAGTG
AAACAGCTGTACGAAGTGGACATTGCTCGAGTGAACACTTTAATCAGACCCGATGGAAAG
AAGAAGGCTTACGTCAAACTTGCACCTGATTATGATGCGCTTGACGTTGCTAATAAAATT
GGAATTATATAAATTTCCATTTTATTGTCTTACTAATAAATATCGATGGAAAA

InterProScan

Pfam
Ribosomal_L23/L25_N (IPR005633) - T[7-56] 2.2E-21
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[28-146] 1.2E-59
SUPERFAMILY
Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[64-139] 7.55E-28
Pfam
Ribosomal_L25/23 (IPR013025) - T[66-129] 1.4E-16
Hamap
Ribosomal_L25/23 (IPR013025) - T[66-146] 22.736
TIGRFAM
Ribosomal_L23 (IPR019985) - T[70-146] 8.0E-31
ProSitePatterns
Ribosomal_L23/L25_CS (IPR001014) - T[124-139] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL23A_HUMAN 76.19 % 199 6.71E-67