- Transcript 'KH2012:KH.C2.638.v1....' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S91...' >
- Molecular Tool 'cieg14j10-MO' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S114361.g13401.01.t
Possible name(s)
HSPG2; LRP1B; VLDLR
Gene model
Location
S114361 [1,842 / 6,516]
Amino acid sequence
Length: 424
>Moocul.CG.ELv1_2.S114361.g13401.01.p
MWSCRYLAVVALCIFSTNVSAAIADSNNCGLLETTDYHLDVSCIRQRKAQSVMHTFKGST
KEECIQACCNWSEGPCDVVYWDHSKTCLIMSYYVIAICPLLTVAIPITYSSHDSSFVPSQ
YVMMRIDNKRAINIELKKHLRIKYQTEIKSILNCAEDDALCSNWECIDSRLDCNGVDDCS
DGSDEMDCLNINRTRKVAHCVDKHGAFVYPGSYFERTSGTDPCEKCRCLSDGSAACTDLL
CAITCVIKPGTCCECDENYVNGDSYINLSSTQRLVVSCMSVLAVISMLLFFSRNILQRRN
SSRSNINVSWFNRREGRFQSSLGNMGTEMEQYSGYNGQSDLPPPYVLVKPPEASDSESAP
PPSYEQVTEEQIQRESDDRRGDNETEPEAVAAEEDSLQEEEEEVQPQSPLSISSEAPLIQ
QNNR
Nucleotide sequence
Length: 2,072
>Moocul.CG.ELv1_2.S114361.g13401.01.t
TTGATTGTTATAGGTTAGAGCTATAAGCAGTGTATCGATGTAGTTCTTTGACAAAATAGC
TAATTAATTGTAGCTTAATCGTACACGATGTGGTCATGCCGATATCTTGCAGTCGTTGCA
CTTTGCATATTTTCAACCAATGTATCAGCGGCGATTGCCGATAGCAACAACTGCGGATTG
CTTGAAACGACGGATTATCATTTGGATGTTTCGTGCATAAGACAGCGGAAAGCACAAAGT
GTGATGCACACCTTTAAAGGCAGCACAAAGGAAGAGTGCATTCAAGCGTGTTGCAATTGG
TCTGAAGGTCCATGTGACGTTGTGTATTGGGATCACTCGAAGACGTGTTTGATTATGAGT
TACTACGTGATTGCAATATGTCCACTTCTTACGGTGGCGATTCCAATCACGTATTCTTCC
CACGATTCGTCATTTGTGCCGTCGCAATACGTGATGATGAGAATCGACAACAAACGAGCC
ATCAACATCGAACTCAAAAAACATCTGAGAATAAAATACCAGACTGAAATCAAATCAATA
TTGAACTGCGCCGAGGACGATGCTCTTTGTTCGAATTGGGAATGCATCGATTCACGATTG
GATTGTAACGGAGTTGATGATTGTTCTGATGGATCGGATGAGATGGATTGTTTGAATATT
AATCGGACGCGCAAAGTTGCACATTGTGTCGACAAACACGGTGCATTTGTTTACCCGGGA
AGTTACTTTGAACGAACGAGTGGAACGGACCCGTGTGAGAAATGCCGTTGCTTAAGTGAT
GGTTCGGCCGCTTGTACTGATCTTCTTTGTGCCATCACATGTGTCATTAAGCCTGGAACA
TGCTGTGAATGTGATGAAAACTATGTCAATGGAGATTCATACATCAACTTATCAAGCACA
CAACGTCTTGTGGTCAGTTGCATGTCCGTCCTTGCGGTCATTTCTATGCTCCTCTTCTTT
TCGAGAAATATTCTGCAGCGGCGTAATTCATCCCGATCAAATATCAACGTCAGTTGGTTC
AACAGACGAGAGGGAAGATTTCAAAGTTCTTTGGGCAATATGGGAACGGAAATGGAACAA
TATTCGGGTTATAACGGACAAAGCGATCTTCCACCTCCGTATGTTCTCGTAAAACCACCG
GAGGCATCTGACAGTGAAAGCGCTCCACCACCTTCCTATGAGCAAGTGACTGAAGAACAA
ATTCAACGAGAATCGGACGATCGACGAGGAGACAATGAAACTGAGCCAGAAGCTGTTGCG
GCTGAAGAAGATTCCTTACAAGAGGAAGAAGAGGAGGTTCAACCGCAGAGTCCTCTCAGC
ATCTCGTCTGAAGCTCCACTTATTCAACAAAACAATCGCTGAGCAAATACTTTTATATTA
ATTTATATCGAGAAAGAACTTGGACAAATTTATGATTGTCGTAATTATAAATTATTTCGC
CGTTTATTCTTTTCTAAAATTCAAGATTCAACTTAGTTTTATTGTAATTACAAACCGAAT
AAGGAGTAATCTGGTTTCTATATGCAGGGTACGCATTCCCACTTAGCTAACAACCAAAAT
TCCCTGCCTTGATTTTTAATGGAATCTATCAATTTTAAGGCGTTTGTAGTTTATCCGGTT
AACGCTATAATTATCATTTAGCAGGTGATTTGAATCCTGTTATACAAGCAAGAAGTTGCA
AAGTACTTTGTTTTATTATTTTGCGATCACACTTGCGTGTCATTTCTCTGTTTACTGATA
CACTGACTCTGTGCTAACGTTTTCTTAAATAATGCATTTATTTGTACATTGCAATTATGC
TGTTATTTCTTACATGCTTTTAATTGTCTAATGACACGAATATAGCTTGCTATATTTCGA
TACGAGCAACTTAACAATTTATCTCGGTGCCATTATACATGAGTTGATATCATGTTCACA
CTTTTTAATGCAGATATTTTACTTAAACGAATTTAATTGTGTTTTATTGTAATATTTCGA
AATGTTTTATTTTATTTTGTTGTGTACAGATGTTTATTTTATCTTTTAATGTTTTATCGT
CAAATACGATGTTTAATTTTACAATATTTTTA
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[151-189] 1.7E-8 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[153-188] 1.1E-6 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[153-190] 3.2E-5 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[153-189] 11.8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[154-188] 1.55455E-8 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[166-188] . |
| Protein Name | Identity | Bit Score | e-value |
|---|