- Transcript 'Cisavi.CG.ENS81.R165...' >
- Transcript 'KH2012:KH.C2.216.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S4760.g06549.03.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
S4760 [2,581 / 4,419]
Amino acid sequence
Length: 420
>Phfumi.CG.MTP2014.S4760.g06549.03.p
MSSGDFICNGGSDWLEESLKENDPDIYRIIRNEKERQRDGLELIASENFASAAVLQALGS
CLNNKYSEGYPGVRYYGGTENIDELERLCQKRALNLYNLSPEEWGVNVQPYSGSPGNFAV
YTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGLIDYDQLA
TNARLFKPKMIIAGMSCYPRLLDYEKFRKIASENQAYLMADMAHVSGLVAAGVIASPFKH
CDIVTSTTHKTLRGPRAGIIFYRRGIRFPATQAKSAVMYNLEKPINEAVFPGLQGGPHNH
AIAGVAVALHQAATPQFVEYQKQVIRNAQELARSLVKMGYTIVSGGTDTHLILVNLTSKG
TDGNRADKVLELIGVACNKNTCPGDKSALRPSGLRLGSPALTSRGLNENHFQKVAEFVDR
Nucleotide sequence
Length: 1,260
>Phfumi.CG.MTP2014.S4760.g06549.03.t
ATGTCTTCTGGTGATTTTATTTGCAACGGCGGCTCGGACTGGCTGGAGGAATCGCTCAAA
GAAAATGACCCAGATATTTACAGGATCATTCGAAACGAAAAAGAGCGACAGAGAGATGGA
CTGGAACTGATCGCATCAGAAAATTTTGCGAGCGCCGCCGTCTTGCAAGCTCTTGGGTCA
TGTTTAAACAACAAGTATTCGGAGGGATACCCGGGTGTGAGATATTACGGTGGCACTGAA
AATATTGATGAATTAGAAAGGCTGTGTCAAAAACGAGCACTAAATCTGTACAATTTGTCA
CCAGAAGAATGGGGAGTAAATGTGCAGCCATATTCTGGTTCACCTGGCAATTTTGCAGTT
TATACTGCAATTGTTGAGCCCCATGGACGCATCATGGGATTGGATTTACCAGATGGAGGA
CATTTGACCCATGGTTTTATGACAGAAAAAAAGAAAATATCTGCAACTTCTATCTTTTTT
GAATCCATGCCATATAAGGTTAACCCAGAAACAGGTTTGATAGATTATGACCAACTTGCA
ACCAATGCCAGATTGTTTAAACCGAAAATGATAATAGCAGGAATGAGCTGTTACCCTCGT
CTCCTGGACTATGAAAAATTTAGAAAGATTGCTTCAGAAAATCAAGCTTACTTAATGGCA
GACATGGCTCATGTTAGTGGGCTGGTGGCTGCTGGGGTTATTGCTTCACCATTTAAACAC
TGTGACATTGTGACAAGCACCACTCATAAAACACTAAGAGGTCCACGTGCAGGGATTATA
TTCTATCGACGTGGTATTAGATTTCCAGCAACCCAAGCAAAGTCTGCTGTCATGTACAAC
CTGGAAAAGCCAATAAACGAAGCAGTGTTTCCTGGGCTACAGGGTGGACCACATAATCAT
GCAATAGCTGGTGTTGCTGTAGCTTTACATCAAGCAGCAACTCCACAGTTTGTTGAATAT
CAAAAGCAGGTAATTAGAAATGCACAGGAGCTTGCAAGATCTCTCGTCAAAATGGGTTAT
ACCATTGTTTCTGGTGGCACTGATACTCATCTTATTCTTGTAAATCTAACGAGCAAGGGG
ACAGATGGAAATCGTGCTGACAAAGTTCTTGAGTTAATTGGTGTTGCTTGCAACAAAAAC
ACATGCCCTGGTGACAAGTCAGCTTTGCGGCCAAGTGGTTTAAGACTAGGATCGCCAGCA
CTGACCTCAAGAGGTTTAAATGAAAATCATTTCCAAAAAGTTGCTGAGTTTGTTGACAGG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[8-420] 2.0E-167 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[14-420] 6.61E-171 |
| PANTHER |
Ser_HO-MeTrfase (IPR001085) - T[16-420] 6.8E-218 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[18-420] 40.571 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[20-420] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[23-420] 1.4E-200 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[48-322] 1.4E-200 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[242-258] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 73.399 % | 608 | 0 |
| GLYM_HUMAN | 64.604 % | 574 | 0 |