- Transcript 'KH2012:KH.C2.643.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C1.264.v3....' >
- Transcript 'Phfumi.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S3611.g05830.01.t
Possible name(s)
CCT3; CCT4; CCT5
Gene model
Location
S3611 [5,346 / 9,200]
Amino acid sequence
Length: 497
>Phfumi.CG.MTP2014.S3611.g05830.01.p
MLMDPMGGIVMTNDGNAILREITVQHPAAKTMIEISRTQDEEVGDGTTSVIILAGEMMSA
AEQFLQQKMHPTVIIAAYRKALDDMQTFLTELSVEIDVTKAEEMRKIVKSAIGTKFINKW
AELACDMAIKSVSTVSMENVSTGRREIDIKRYAKVEKVPGGTLEDSQVLDGVMLNKDITH
PGMKRKIENPRILLLDCSLEYQKGESQTDMELSKDVDFEKVLQMEEDYIRRITAEIISFK
PDLVFTEKGISDLAQYFLSKANITAIRRVRKSDNNRIARACGGTVCSRTDEIREEDIGKG
AGLFEIKKFGDEYFTFITKCQDPKACTILLRGASKDILMEVERNLQDAMQVARNVMINPR
LVPGGGAVEMAVAQRMKEKSKTMTGVEQWPYRAVAEALEVIPRTLIQNCGASTIRTLTAL
RAKHATDGNTTWGVNGEAGEIVDMKKLDIWEPLSVKQQTYKTAMETAMLLLRIDDIVSGS
KKAEGKEGTGVAAPTAE
Nucleotide sequence
Length: 1,494
>Phfumi.CG.MTP2014.S3611.g05830.01.t
ATGTTAATGGATCCTATGGGAGGGATTGTAATGACAAATGATGGGAATGCTATCCTACGT
GAGATCACAGTCCAACATCCAGCTGCTAAAACAATGATTGAAATCAGCAGAACCCAGGAT
GAAGAAGTTGGGGATGGAACAACATCAGTCATCATACTAGCTGGTGAGATGATGTCTGCA
GCTGAACAGTTTCTCCAACAAAAGATGCATCCCACTGTGATTATTGCTGCTTATCGCAAA
GCCTTGGATGACATGCAAACCTTCCTTACTGAACTTAGTGTGGAAATTGATGTGACAAAA
GCAGAGGAGATGCGAAAAATAGTGAAAAGTGCAATTGGAACTAAGTTTATCAACAAATGG
GCTGAGCTCGCTTGTGATATGGCTATCAAGTCTGTCAGCACAGTATCCATGGAGAATGTC
AGCACTGGGCGGCGTGAGATTGACATTAAGCGATATGCCAAAGTAGAAAAAGTACCTGGT
GGAACTCTAGAAGATTCCCAAGTTTTGGATGGTGTAATGTTAAACAAGGACATTACTCAT
CCTGGAATGAAGAGGAAGATTGAAAATCCTCGCATCCTTCTTCTTGATTGTTCCCTGGAA
TATCAAAAAGGAGAAAGCCAGACTGACATGGAGCTCAGTAAAGATGTTGACTTTGAGAAA
GTCCTCCAGATGGAAGAGGATTACATTCGCAGAATCACTGCTGAAATCATCAGTTTCAAG
CCAGATCTTGTCTTCACCGAAAAAGGAATTTCAGATTTGGCCCAGTATTTCTTGTCCAAA
GCCAACATAACAGCTATCAGACGTGTTCGCAAATCGGATAACAATAGAATTGCTCGCGCA
TGTGGAGGCACTGTGTGTTCACGAACTGATGAGATTCGTGAAGAGGACATTGGAAAGGGT
GCTGGATTGTTTGAAATTAAGAAATTCGGTGATGAATACTTCACTTTCATCACGAAGTGT
CAAGACCCAAAGGCATGCACTATCCTTTTGAGAGGAGCAAGCAAGGACATTCTTATGGAG
GTAGAGAGGAACTTACAGGACGCCATGCAAGTTGCTCGTAATGTTATGATTAACCCCAGG
CTTGTGCCAGGCGGTGGCGCTGTGGAGATGGCAGTGGCACAGAGAATGAAAGAGAAGTCA
AAGACGATGACAGGAGTGGAACAGTGGCCATACCGTGCAGTGGCAGAAGCACTTGAAGTT
ATTCCAAGAACGTTGATACAAAACTGCGGCGCAAGCACTATCCGCACACTGACAGCACTC
CGGGCTAAGCACGCTACTGACGGCAACACAACATGGGGAGTCAATGGAGAAGCCGGAGAA
ATCGTTGACATGAAGAAGCTCGATATTTGGGAGCCTCTCTCTGTCAAGCAGCAAACGTAC
AAGACTGCTATGGAGACCGCTATGTTACTTTTGCGCATTGATGACATCGTATCTGGAAGC
AAGAAGGCAGAAGGCAAAGAAGGCACTGGCGTCGCTGCCCCTACTGCAGAATAA
| CDD |
Chap_CCT_gamma (IPR012719) - T[1-479] 0.0 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[1-478] 7.4E-155 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[1-479] 2.62E-73 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[1-476] 1.7E-169 |
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[1-482] 7.9E-253 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[9-27] 7.7E-23 - T[39-58] 7.7E-23 - T[327-349] 7.7E-23 - T[361-373] 7.7E-23 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[11-27] . - T[39-47] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[96-358] 1.7E-169 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[96-358] 1.68E-24 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[165-332] 4.19E-52 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[170-322] 1.7E-169 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPG_HUMAN | 70.161 % | 739 | 0 |
| TCPD_HUMAN | 32.025 % | 264 | 5.42E-82 |
| TCPE_HUMAN | 33.68 % | 271 | 5.72E-85 |