- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1.g00016.01.t
Possible name(s)
VPS36
Gene model
Location
S1 [354,376 / 357,852]
Amino acid sequence
Length: 358
>Phfumi.CG.MTP2014.S1.g00016.01.p
KTSYDEGSLMLTTHQIIWRDSSNFQICISLPLYLVVFCEKQSAGIGKSAKLSLHLQATQA
NRAPGPVSRSRFDYVRFSFKSGGESEFHAKLQDAIQKKEWESNSSHSTSSPTSRSTSKTG
PIRASGIVGIERKIEENRRVTDQNISVAFQDLTKLMEKAKEMVSLSSNIANKIKDKKGDI
TDDETVKFKSYLLSLGIPNPVTKETHGSGTHYHMQLAHEIAALLKSPLEENAGIMLLSDA
YCRINRARGMELLSPEDLLNACRMLDNLKLHMKLRQFDTGVLVLQLDSHSDEKVISQTIE
LVDDSKSLSAQELANLVSVSVLLAKERLLLAERAGKLCRDDSDEGLRFYPNLFAQPMR
Nucleotide sequence
Length: 1,077
>Phfumi.CG.MTP2014.S1.g00016.01.t
AAGACAAGCTATGACGAAGGTTCTTTGATGCTTACAACACATCAAATAATTTGGAGAGAT
TCATCTAACTTTCAAATTTGTATTTCCCTCCCATTGTACCTTGTCGTTTTCTGTGAAAAA
CAATCAGCAGGCATTGGAAAAAGTGCGAAGCTTAGTCTTCATTTGCAAGCAACACAAGCA
AACCGGGCTCCTGGACCTGTTTCAAGGAGCCGTTTTGATTATGTTAGATTTTCTTTCAAA
AGTGGCGGGGAATCTGAATTTCATGCCAAACTTCAGGATGCTATACAGAAAAAAGAATGG
GAAAGCAATTCTTCACACAGCACTTCAAGCCCAACAAGCAGGAGCACATCAAAGACTGGC
CCAATTAGAGCCTCTGGGATTGTTGGAATTGAACGAAAAATCGAGGAAAATCGAAGAGTC
ACTGATCAAAACATTTCAGTTGCATTTCAAGACTTGACAAAACTGATGGAAAAAGCAAAA
GAAATGGTTTCCCTCTCATCAAACATTGCAAACAAAATCAAGGACAAGAAAGGAGACATC
ACTGATGATGAGACAGTTAAGTTCAAGTCCTACCTTCTTAGCTTGGGTATTCCCAACCCT
GTGACAAAGGAAACACATGGAAGTGGAACTCATTATCACATGCAGTTGGCACATGAGATT
GCTGCATTACTTAAATCACCATTGGAAGAGAATGCAGGAATAATGCTTTTATCCGATGCC
TACTGTCGAATTAACAGAGCAAGAGGCATGGAGCTCCTGTCTCCTGAGGATCTTCTAAAT
GCTTGTCGGATGTTGGACAATTTAAAACTTCACATGAAGTTGAGACAATTTGACACTGGA
GTCTTAGTTCTGCAGCTTGACTCTCACAGTGATGAGAAAGTCATCAGCCAAACAATAGAG
CTGGTGGACGACAGCAAGAGTTTAAGTGCTCAAGAACTTGCAAACTTGGTCAGTGTATCA
GTTCTGCTAGCAAAAGAGAGGTTACTTTTAGCGGAGAGAGCTGGCAAATTATGTCGGGAT
GATTCTGACGAAGGCCTGAGATTCTATCCCAACTTGTTTGCTCAACCAATGCGATGA
| PANTHER |
Vps36 (IPR037855) - T[1-355] 1.3E-128 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1-107] 5.4E-33 |
| ProSiteProfiles |
GLUE_dom (IPR021648) - T[1-107] 18.296 |
| Pfam |
GLUE_dom (IPR021648) - T[2-56] 3.3E-6 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[156-281] 1.2E-9 - T[248-354] 7.25E-27 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[208-287] 4.0E-32 - T[288-356] 8.7E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS36_HUMAN | 58.357 % | 438 | 3.6E-154 |
