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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1310.g03556.01.t

Possible name(s)

RDH11; RDH13

Gene model

Phfumi.CG.MTP2014.S1310.g03556

Location

S1310 [4,805 / 5,900]

Sequences

Amino acid sequence

Length: 202

>Phfumi.CG.MTP2014.S1310.g03556.01.p
MANPVSAEGSWVRSGVKLCEKTVIITGANTGIGLFTAINLAERQAKVILACRNLEKAELA
KQKILAEAKCPENRVVIKSLDLSSFASIRKFAEDINATEERLDILINNAGVMMCPEGKTE
DGFEIQFGVNHVGHFLLTNLLLELIKTSAPSRILNVTSAFHKYGRMNFDDLNGTNNYSPM
KAYGQSKLCNILFTRFLARKLE

Nucleotide sequence

Length: 606

>Phfumi.CG.MTP2014.S1310.g03556.01.t
ATGGCTAACCCTGTGAGTGCAGAGGGAAGCTGGGTTCGTTCTGGTGTAAAATTGTGTGAA
AAAACTGTGATCATTACTGGAGCAAATACTGGAATTGGATTGTTCACAGCAATTAATTTG
GCGGAGCGTCAAGCAAAAGTTATCCTTGCTTGTCGAAATTTGGAAAAAGCAGAACTTGCT
AAACAAAAGATACTTGCTGAAGCAAAGTGCCCAGAAAACAGAGTTGTCATTAAAAGTCTT
GATCTTTCTTCCTTCGCATCAATCAGAAAATTTGCTGAAGATATAAATGCAACAGAAGAA
AGACTTGACATACTTATAAATAATGCTGGAGTTATGATGTGTCCTGAAGGAAAAACAGAA
GATGGATTTGAGATCCAATTTGGTGTAAATCACGTTGGACACTTTTTACTCACAAATTTG
CTTCTTGAGCTTATCAAGACAAGTGCTCCAAGTCGTATTCTAAATGTCACTTCAGCATTC
CACAAATATGGAAGAATGAACTTTGATGATTTGAATGGTACTAACAACTATTCACCAATG
AAAGCTTATGGTCAAAGCAAGTTATGCAACATCCTATTTACTCGATTTCTAGCCAGAAAA
TTAGAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-201] 1.24E-45
Pfam
SDR_fam (IPR002347) - T[21-200] 1.5E-25
PRINTS
SDR_fam (IPR002347) - T[22-39] 2.0E-11 - T[100-111] 2.0E-11 - T[100-111] 3.8E-7 - T[145-161] 2.0E-11 - T[151-159] 3.8E-7 - T[183-202] 2.0E-11 - T[183-202] 3.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 55.026 % 184 5.13E-58
RDH13_HUMAN 57.923 % 187 5.22E-59
RDH12_HUMAN 53.608 % 182 3.83E-57