Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S7...'

Gene Card

Best human hits

AKAP17A

Species

P.mammillata

Unique Gene ID

Phmamm.g00002601

Gene Model ID

Phmamm.CG.MTP2014.S75.g02601

Location

S75:132262..139827

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA83YB01

Plate: Plate_83_B01

AHC0AAA164YK15

Plate: Plate_164_K15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

No result

IPR Term Analysis Definition

GOSlim

15 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytosol Orthology cellular component
regulation of transcription, DNA-templated Orthology biological process
mRNA processing Orthology biological process
signal transduction Orthology biological process
RNA splicing Orthology biological process
nuclear speck Orthology cellular component
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
cellular process Orthology biological process
immune system process Orthology biological process
regulation of gene expression Orthology biological process

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
spliceosomal complex Hs cellular component
cytosol Hs cellular component
regulation of transcription, DNA-templated Hs biological process
mRNA processing Hs biological process
signal transduction Hs biological process
RNA splicing Hs biological process
nuclear speck Hs cellular component
B cell activation Hs biological process
regulation of RNA splicing Hs biological process
protein kinase A binding Hs molecular function

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 375 1.88e-123
RNA binding Hs molecular function 375 1.88e-123
protein binding Hs molecular function 375 1.88e-123
nucleus Hs cellular component 375 1.88e-123
spliceosomal complex Hs cellular component 375 1.88e-123
cytosol Hs cellular component 375 1.88e-123
nuclear speck Hs cellular component 375 1.88e-123
protein kinase A binding Hs molecular function 375 1.88e-123

GO (InterProScan)

No result

GO Term Analysis Type e-value