Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S5...'

Gene Card

Best human hits

FGL1; FGL2; FIBCD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00009987

Gene Model ID

Phmamm.CG.MTP2014.S551.g09987

Location

S551:94480..98395

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA42YJ02

Plate: Plate_42_J02

AHC0AAA47YK16

Plate: Plate_47_K16

AHC0AAA64YG03

Plate: Plate_64_G03

AHC0AAA103YJ05

Plate: Plate_103_J05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom CDD Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_CS ProSitePatterns Fibrinogen, conserved site
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1

GOSlim

14 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
peptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
extracellular space Blast cellular component
macromolecular complex Blast cellular component
carbohydrate derivative binding Blast molecular function
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 118 2.75e-28
extracellular region Hs cellular component 134 7.96e-34
fibrinogen complex Hs cellular component 134 7.96e-34
chitin binding Hs molecular function 118 2.75e-28
peptidase activity Hs molecular function 134 7.96e-34
membrane Hs cellular component 118 2.75e-28
integral component of membrane Hs cellular component 118 2.75e-28
metal ion binding Hs molecular function 118 2.75e-28
extracellular exosome Hs cellular component 134 7.96e-34
ficolin-1-rich granule lumen Hs cellular component 134 7.96e-34

GO (InterProScan)

No result

GO Term Analysis Type e-value